RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 EPHA5P54756 1037 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 PGGHGQ32M88 737 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 DEFB119Q8N690 84 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 RTP3Q9BQQ7 232 aa10.83□□□□□ -0.68
VPS13A-205ENST00000376636 SCN3AQ9NY46 2000 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 PEX10O60683 326 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 CDKN2DP55273 166 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 WNT7BP56706 349 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 KLRG1Q96E93 195 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 NPY6RQ99463 290 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 S1PR3Q99500 378 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 UBQLN4Q9NRR5 601 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 DMAC2Q9NW81 257 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ADRA2CP18825 462 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 DCTP40126 519 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 DCAF7P61962 342 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ETFRF1Q6IPR1 90 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 CYS1Q717R9 158 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 SLC12A9Q9BXP2 914 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 PLRG1O43660 514 aaKnown RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 OR2J3O76001 311 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF93P35789 620 aaPredicted RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 OR7E24Q6IFN5 339 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 LBX2Q6XYB7 198 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 WDR76Q9H967 626 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 FBXO34Q9NWN3 711 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 PISDQ9UG56 409 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 RAB22AQ9UL26 194 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 KIR2DS1A0A191URI9 304 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 NME4O00746 187 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 IGHEP01854 428 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ORM1P02763 201 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 FBP1P09467 338 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 KIR2DS4P43632 304 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 OR10A3P58181 314 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 KIR2DS1Q14954 304 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ACVR1CQ8NER5 493 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 OR13C8Q8NGS7 320 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 LYSMD1Q96S90 227 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 SPATA6Q9NWH7 488 aaPredicted RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 LAMP3Q9UQV4 416 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 TRAV27A0A087WT01 109 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 TNFRSF1BP20333 461 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 OR4D1Q15615 310 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ENTPD8Q5MY95 495 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 IFI44Q8TCB0 444 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 IKZF4Q9H2S9 585 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 CEACAM7Q14002 265 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 RALYQ9UKM9 306 aaKnown RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 IGLON5A6NGN9 336 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 AHRP35869 848 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 AGFG1P52594 562 aaKnown RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 KRTDAPP60985 99 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 TMEM135Q86UB9 458 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 NAGSQ8N159 534 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ABOP16442 354 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 GDF1P27539 372 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 UBE2IP63279 158 aaKnown RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 KIR2DS3Q14952 304 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 MISPQ8IVT2 679 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF561Q8N587 486 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 TMEM106AQ96A25 262 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 CTXN2P0C2S0 81 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 BLVRBP30043 206 aaPredicted RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 MTNR1BP49286 362 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 ACTR3CQ9C0K3 210 aaPredicted RBP10.82□□□□□ -0.68
VPS13A-205ENST00000376636 GALNT9Q9HCQ5 603 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 CACNG4Q9UBN1 327 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 CAMK2AQ9UQM7 478 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 BCL9O00512 1426 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 RTTNQ86VV8 2226 aa10.82□□□□□ -0.68
VPS13A-205ENST00000376636 CD46P15529 392 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 CLEC9AQ6UXN8 241 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 GDPD3Q7L5L3 318 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 FIBINQ8TAL6 211 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 SFXN1Q9H9B4 322 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 EMC9Q9Y3B6 208 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 OR6C76A6NM76 312 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 DCTN6O00399 190 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 C3P01024 1663 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 SRMP19623 302 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 FECHP22830 423 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 SOX18P35713 384 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 ELLP55199 621 aaPredicted RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 FIGLAQ6QHK4 219 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 OR13D1Q8NGV5 346 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 MRPL22Q9NWU5 206 aaKnown RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 NPIPB15A6NHN6 443 aaPredicted RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 GYPBP06028 91 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 SPINT3P49223 89 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF85Q03923 595 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 IGDCC3Q8IVU1 814 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 KHSRPQ92945 711 aaKnown RBP eCLIP10.81□□□□□ -0.681e-6■■■□□ 18
VPS13A-205ENST00000376636 BRWD1Q9NSI6 2320 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 C10orf71Q711Q0 1435 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 A0A0J9YY10 115 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 WNT11O96014 354 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 GPR17Q13304 367 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms