RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 DLL4Q9NR61 685 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 FBXO4Q9UKT5 387 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 ZMIZ1Q9ULJ6 1067 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 NCOR1O75376 2440 aa13.15□□□□□ -0.3
TNFRSF1B-201ENST00000376259 SERINC4A6NH21 518 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 IGHA1P01876 353 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 LSSP48449 732 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TAS2R20P59543 309 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZIC1Q15915 447 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ALG11Q2TAA5 492 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PLA1AQ53H76 456 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR2L13Q8N349 312 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GALNT6Q8NCL4 622 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GPR119Q8TDV5 335 aa13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC25A44Q96H78 314 aaPredicted RBP13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EXOGQ9Y2C4 368 aaKnown RBP13.15□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 A0A0J9YY10 115 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CD3DP04234 171 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MAPK3P27361 379 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EEF1A1P68104 462 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MLC1Q15049 377 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RAB11BQ15907 218 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TIGD3Q6B0B8 471 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 UNQ6126/PRO20091Q6UXV3 157 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM151BQ8IW70 566 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNRF4Q8WWF5 429 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C3orf49Q96BT1 292 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GIMAP5Q96F15 307 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 INTS14Q96SY0 518 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MCCC2Q9HCC0 563 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CA10Q9NS85 328 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 HPF1Q9NWY4 346 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC39A1Q9NY26 324 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF337Q9Y3M9 751 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ABCA7Q8IZY2 2146 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GP1BBP13224 206 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 M6PRP20645 277 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 COL9A1P20849 921 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ENPP1P22413 925 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 FRKP42685 505 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CDKN2AP42771 156 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CXADRP78310 365 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GLYATL3Q5SZD4 288 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 IDO2Q6ZQW0 420 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KCTD20Q7Z5Y7 419 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KLHDC7BQ96G42 594 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 JSRP1Q96MG2 331 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KCNN3Q9UGI6 736 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TRIOO75962 3097 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 BRINP1O60477 761 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 UBL4AP11441 157 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC2A5P22732 501 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CEBPGP53567 150 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PLCXD2Q0VAA5 305 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 Q499Y3 187 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 STAC2Q6ZMT1 411 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MDGA2Q7Z553 956 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PDZD9Q8IXQ8 264 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC35F3Q8IY50 421 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF454Q8N9F8 522 aa13.14□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PRAMEF2O60811 474 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ADAM11O75078 769 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NGFRP08138 427 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 S1PR1P21453 382 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 S100A10P60903 97 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KLHL24Q6TFL4 600 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF546Q86UE3 836 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR13C3Q8NGS6 347 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EMC6Q9BV81 110 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NUP50Q9UKX7 468 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 COL4A6Q14031 1691 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 AHSA1O95433 338 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 THBS1P07996 1170 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ACHEP22303 614 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC6A9P48067 706 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DIO1P49895 249 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ALKBH1Q13686 389 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF425Q6IV72 752 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ARSKQ6UWY0 536 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SMIM4Q8WVI0 70 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TSLPQ969D9 159 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CXorf58Q96LI9 332 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 INPP5EQ9NRR6 644 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SDHAF2Q9NX18 166 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC17A4Q9Y2C5 497 aa13.13□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms