RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 GLYATL3Q5SZD4 288 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF793Q6ZN11 406 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 AVL9Q8NBF6 648 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 OR4K15Q8NH41 348 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 GOT1L1Q8NHS2 421 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 BARHL1Q9BZE3 327 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 NXF5Q9H1B4 397 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SLC38A1Q9H2H9 487 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 KCNK15Q9H427 330 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 KIR3DX1Q9H7L2 352 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 LRIT1Q9P2V4 623 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 CRABP1P29762 137 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SRSF5Q13243 272 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 CAMK2DQ13557 499 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 PLEKHN1Q494U1 663 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM215Q68D42 235 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 EIF5AL1Q6IS14 154 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 DVL2O14641 736 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF254O75437 659 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 CD160O95971 181 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 DCTDP32321 178 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 MEF2DQ14814 521 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 LCN10Q6JVE6 187 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 CCDC71Q8IV32 467 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TCTE3Q8IZS6 198 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SDF2Q99470 211 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 RBM24Q9BX46 236 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 EVA1BQ9NVM1 165 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SMCO3A2RU48 225 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 HSPB6O14558 160 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF264O43296 627 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 NUDT21O43809 227 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 FBXO24O75426 580 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SPI1P17947 270 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 NPY4RP50391 375 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 DLX5P56178 289 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 PPP2CBP62714 309 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 PPP2CAP67775 309 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 C3orf33Q6P1S2 294 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 LSRQ86X29 649 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 OR6V1Q8N148 313 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 OR4N2Q8NGD1 307 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ADAMTS18Q8TE60 1221 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 GAS2L1Q99501 681 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ARHGDIGQ99819 225 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 LMF2Q9BU23 707 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF646O15015 1829 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 OR5K4A6NMS3 321 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TOR1AO14656 332 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TSPAN15O95858 294 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ACHEP22303 614 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 CHATP28329 748 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 S100A11P31949 105 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 P2RX1P51575 399 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 FAM74A1Q5RGS3 127 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF704Q6ZNC4 412 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 RELL2Q8NC24 303 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 C2CD4CQ8TF44 421 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 C3orf49Q96BT1 292 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 UBE2J1Q9Y385 318 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 C9J4A7 227 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SBK2P0C263 348 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 HOXC12P31275 282 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SLC6A8P48029 635 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TAS2R31P59538 309 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ACY1Q03154 408 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SLC16A9Q7RTY1 509 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 OVCH1Q7RTY7 1134 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 MIB2Q96AX9 1013 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ST6GAL2Q96JF0 529 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ANKRD19PQ9H560 264 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM231Q9H6L2 316 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 IL21Q9HBE4 155 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SAGE1Q9NXZ1 904 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 THAP10Q9P2Z0 257 aaPredicted RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 IGHV3-20A0A0C4DH32 117 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SERPINA5P05154 406 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TRAPPC2P0DI81 140 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TRAPPC2BP0DI82 140 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 GNB3P16520 340 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TEKQ02763 1124 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SLC36A2Q495M3 483 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 TEX261Q6UWH6 196 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 FAM3CQ92520 227 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SLC52A3Q9NQ40 469 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 CUTCQ9NTM9 273 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 U3KQ87 197 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 A0A1W2PS29 197 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 A6NIZ1 184 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 IDSB3KWA1 339 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 GLCEO94923 617 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 TPOP07202 933 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 ADPRHP54922 357 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 RAP1BP61224 184 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 RAP1AP62834 184 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 STEAP1BQ6NZ63 245 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 GPR155Q7Z3F1 870 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 FGGYQ96C11 551 aa6□□□□□ -1.45
SMC1A-202ENST00000375340 Q96M85 177 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms