RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 GRNP28799 593 aaKnown RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 RPL4P36578 427 aaKnown RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 PEX19P40855 299 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 RPL27P61353 136 aaKnown RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 FAM27E3Q08E93 113 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 COX10Q12887 443 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 CAMK2DQ13557 499 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 P2RY6Q15077 328 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 ARMC4Q5T2S8 1044 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 FAM205BPQ63HN1 556 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 DPY19L2P2Q6ZN68 376 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 FAM122BQ7Z309 247 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 ABHD12BQ7Z5M8 362 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 KIF18BQ86Y91 864 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 C20orf196Q8IYI0 205 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 UBE2J2Q8N2K1 259 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 SVOPLQ8N434 492 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 ACBD4Q8NC06 268 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 STMN2Q93045 179 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 SLC25A44Q96H78 314 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 TSPAN32Q96QS1 320 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 PKP2Q99959 881 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 KATNB1Q9BVA0 655 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 POLDIP3Q9BY77 421 aaKnown RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 ENKD1Q9H0I2 346 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 GABARAPL1Q9H0R8 117 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 SEMA6AQ9H2E6 1030 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 ASB6Q9NWX5 421 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 IL20Q9NYY1 176 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF346Q9UL40 294 aaKnown RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 MAGED1Q9Y5V3 778 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 CDH10Q9Y6N8 788 aa13.25□□□□□ -0.29
HSPG2-201ENST00000374673 FASNP49327 2511 aaKnown RBP13.25□□□□□ -0.29
HSPG2-201ENST00000374673 TENM4Q6N022 2769 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 FLNCQ14315 2725 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 G3V2T6 193 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 UPK3AO75631 287 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 TP53P04637 393 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-201ENST00000374673 PGA4P0DJD7 388 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 PGA3P0DJD8 388 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 APEHP13798 732 aaKnown RBP13.24□□□□□ -0.29
HSPG2-201ENST00000374673 ACADSP16219 412 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 PRKACGP22612 351 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 IGHV1-2P23083 117 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 SLC6A6P31641 620 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 CCKARP32238 428 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 UGT2B10P36537 528 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 FAPQ12884 760 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 ITGADQ13349 1161 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 TOP3AQ13472 1001 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-201ENST00000374673 SFRP5Q5T4F7 317 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 FAHD1Q6P587 224 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 KLHL17Q6TDP4 642 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 STAC2Q6ZMT1 411 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 CXorf67Q86X51 503 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-201ENST00000374673 ZDHHC13Q8IUH4 622 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF519Q8TB69 540 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 TMEM54Q969K7 222 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF566Q969W8 418 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 ALKBH3Q96Q83 286 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-201ENST00000374673 HDHD5Q9BXW7 423 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 MRPL13Q9BYD1 178 aaKnown RBP13.24□□□□□ -0.29
HSPG2-201ENST00000374673 OR10A4Q9H209 315 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 EGLN3Q9H6Z9 239 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 TAS2R16Q9NYV7 291 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
HSPG2-201ENST00000374673 SPTBN1Q01082 2364 aaKnown RBP13.24□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF587BE7ETH6 402 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 RPL36A-HNRNPH2H7BZ11 118 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 TRMUO75648 421 aaKnown RBP13.23□□□□□ -0.29
HSPG2-201ENST00000374673 KRT33AO76009 404 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 TXNDC12O95881 172 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 IGHG1P01857 330 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 ITGA5P08648 1049 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 MPGP29372 298 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 CSNK1A1P48729 337 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 RPS6KA3P51812 740 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 ERVK-25P63136 954 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 LGALS3BPQ08380 585 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 PHYHD1Q5SRE7 291 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 CARD17Q5XLA6 110 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 GPR139Q6DWJ6 353 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 LINGO2Q7L985 606 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF433Q8N7K0 673 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-201ENST00000374673 ARIH2OSQ8N7S6 290 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 ATG16L2Q8NAA4 619 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 NOXO1Q8NFA2 376 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 OR52L1Q8NGH7 329 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 OR6N1Q8NGY5 312 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 HDAC2Q92769 488 aaKnown RBP13.23□□□□□ -0.29
HSPG2-201ENST00000374673 SAMD8Q96LT4 415 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 PLA2G12AQ9BZM1 189 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF556Q9HAH1 456 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 B3GAT2Q9NPZ5 323 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 GRHPRQ9UBQ7 328 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms