RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 CPED1A4D0V7 1026 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 ORC5O43913 435 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 BTCP35070 178 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 P2RX1P51575 399 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 MTFR2Q6P444 385 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 ADGRG3Q86Y34 549 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 HAVCR2Q8TDQ0 301 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 GPR119Q8TDV5 335 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 RNF170Q96K19 258 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 OR11A1Q9GZK7 315 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 NDEL1Q9GZM8 345 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 GALNT9Q9HCQ5 603 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 ASCC3Q8N3C0 2202 aaKnown RBP16.95■□□□□ 0.3
USP49-202ENST00000373010 C2orf72A6NCS6 295 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 ANKRD61A6NGH8 418 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 OR6C76A6NM76 312 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 TIAF1O95411 115 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 RNF4P78317 190 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 ALKBH1Q13686 389 aaKnown RBP16.95■□□□□ 0.3
USP49-202ENST00000373010 PLA1AQ53H76 456 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 YOD1Q5VVQ6 348 aaPredicted RBP16.95■□□□□ 0.3
USP49-202ENST00000373010 MAMDC2Q7Z304 686 aaPredicted RBP16.95■□□□□ 0.3
USP49-202ENST00000373010 SLC7A5P1Q8MH63 180 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 THEM6Q8WUY1 208 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 YIPF5Q969M3 257 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 PCDHGA9Q9Y5G4 932 aaKnown RBP16.95■□□□□ 0.3
USP49-202ENST00000373010 CACNA1EQ15878 2313 aa16.95■□□□□ 0.3
USP49-202ENST00000373010 CACNA1CQ13936 2221 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 ZNF354AO60765 605 aaPredicted RBP16.94■□□□□ 0.3
USP49-202ENST00000373010 UBL3O95164 117 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 ARSBP15848 533 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 SOX2P48431 317 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 ARRB1P49407 418 aaPredicted RBP16.94■□□□□ 0.3
USP49-202ENST00000373010 POLR2HP52434 150 aaKnown RBP16.94■□□□□ 0.3
USP49-202ENST00000373010 TMEM53Q6P2H8 277 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 LRRC69Q6ZNQ3 347 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 PRSS45Q7RTY3 260 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 KCTD20Q7Z5Y7 419 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 OR5AK2Q8NH90 309 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 METTL21AQ8WXB1 218 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 PHYHIPQ92561 330 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 AMELYQ99218 206 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 TMEM165Q9HC07 324 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 H3BSH0 61 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 ADAM10O14672 748 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 HOXD12P35452 270 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 CLDN12P56749 244 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 ACKR1Q16570 336 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 NTRK2Q16620 822 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 RHBDD2Q6NTF9 364 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 GUSBP11Q6P575 273 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 TMEM71Q6P5X7 295 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 CMTM4Q8IZR5 234 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 CREB3L1Q96BA8 519 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 KLHL15Q96M94 604 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 INTS14Q96SY0 518 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 FSCN3Q9NQT6 498 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 TAS2R10Q9NYW0 307 aa16.94■□□□□ 0.3
USP49-202ENST00000373010 TMEM265A0A087WTH1 108 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 IFITM5A6NNB3 132 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 XKRYO14609 159 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 NPIPB7O75200 414 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 ALOX5APP20292 161 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 CENPAP49450 140 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 BCL2A1Q16548 175 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 SGCBQ16585 318 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 C1orf140Q5VVS0 124 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 KANSL1Q7Z3B3 1105 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.93■□□□□ 0.3
USP49-202ENST00000373010 NOXA1Q86UR1 476 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 NPAS1Q99742 590 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 PLSCR3Q9NRY6 295 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 KCNG2Q9UJ96 466 aa16.93■□□□□ 0.3
USP49-202ENST00000373010 DHPSP49366 369 aaPredicted RBP16.92■□□□□ 0.3
USP49-202ENST00000373010 FBXW4P57775 412 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 ODF4Q2M2E3 257 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 COL28A1Q2UY09 1125 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 UBE2NLQ5JXB2 153 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 FAM69AQ5T7M9 428 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 STPG1Q5TH74 334 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 SIAH3Q8IW03 269 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 BMPERQ8N8U9 685 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 OR6C1Q96RD1 312 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 SRPK3Q9UPE1 567 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 CAMK2AQ9UQM7 478 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 WDR87Q6ZQQ6 2873 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 PI4KAP42356 2102 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 OR6C70A6NIJ9 312 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 PDCD5O14737 125 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 MT-ATP6P00846 226 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 MMP15P51511 669 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 PRR23CQ6ZRP0 262 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 ANKRD37Q7Z713 158 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 TOMM5Q8N4H5 51 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 APCDD1LQ8NCL9 501 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 OR10AC1Q8NH08 325 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 MCUBQ9NWR8 336 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 PAQR5Q9NXK6 330 aaPredicted RBP16.92■□□□□ 0.3
USP49-202ENST00000373010 SLCO1C1Q9NYB5 712 aa16.92■□□□□ 0.3
USP49-202ENST00000373010 CPAMD8Q8IZJ3 1885 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms