RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ARV1Q9H2C2 271 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 PATZ1Q9HBE1 687 aaKnown RBP10.67□□□□□ -0.7
VCL-202ENST00000372755 FBXL2Q9UKC9 423 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 XRN1Q8IZH2 1706 aaKnown RBP10.67□□□□□ -0.7
VCL-202ENST00000372755 IMPA2O14732 288 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 PHF1O43189 567 aaPredicted RBP10.67□□□□□ -0.7
VCL-202ENST00000372755 FURINP09958 794 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 FAM74A1Q5RGS3 127 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 L3MBTL4Q8NA19 623 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 NMNAT3Q96T66 252 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 MS4A8Q9BY19 250 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 PIK3C2AO00443 1686 aa10.67□□□□□ -0.7
VCL-202ENST00000372755 METTL15P1P0C7V9 234 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 SELEP16581 610 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 NFYBP25208 207 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 ZNF93P35789 620 aaPredicted RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 EXT1Q16394 746 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 TANGO2Q6ICL3 276 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 SYT13Q7L8C5 426 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 NAXDQ8IW45 347 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 TM7SF3Q9NS93 570 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 MRPS2Q9Y399 296 aaKnown RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 NSA2O95478 260 aaKnown RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 DEFA4P12838 97 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 PAPD4Q6PIY7 484 aaKnown RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 FAM111BQ6SJ93 734 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 SLCO4C1Q6ZQN7 724 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 DPPA2Q7Z7J5 298 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 BARHL1Q9BZE3 327 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 PRSS16Q9NQE7 514 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 LOC100289279A0A1B0GTE1 492 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 RFXAPO00287 272 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 DFFBO76075 338 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 OR10J4P0C629 311 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 EDN3P14138 238 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 FPR3P25089 353 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 MAGEB1P43366 347 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 PSMB3P49720 205 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 CLDN12P56749 244 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 SMN1Q16637 294 aaKnown RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 GLYR1Q49A26 553 aaPredicted RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 STEAP1BQ6NZ63 245 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 ZADH2Q8N4Q0 377 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 OR6M1Q8NGM8 313 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 ARRDC3Q96B67 414 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 WWTR1Q9GZV5 400 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 A0A1B0GWA3 101 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 RRP8O43159 456 aaKnown RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 TRAF3IP2O43734 574 aaPredicted RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 MAKP20794 623 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 NME2P22392 152 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 EDDM3BP56851 147 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 ALKAL2Q6UX46 152 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 NLRP8Q86W28 1048 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 MRPL38Q96DV4 380 aaKnown RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 RANGRFQ9HD47 186 aaPredicted RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 RBFOX1Q9NWB1 397 aaKnown RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 TAS2R16Q9NYV7 291 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 A0A1B0GTW7 788 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 TLCD2A6NGC4 264 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 MT-ATP6P00846 226 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 LAP3P28838 519 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 NEURL3Q96EH8 262 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 SHARPINQ9H0F6 387 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 FN3KRPQ9HA64 309 aa10.66□□□□□ -0.7
VCL-202ENST00000372755 HEYLQ9NQ87 328 aaPredicted RBP10.66□□□□□ -0.7
VCL-202ENST00000372755 CTNSO60931 367 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 CST5P28325 142 aaPredicted RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 TRHRP34981 398 aaPredicted RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 TLE1Q04724 770 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 BAGE3Q86Y29 109 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 OR5D18Q8NGL1 313 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 OR10K1Q8NGX5 313 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 DCBLD2Q96PD2 775 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 ATP13A2Q9NQ11 1180 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 HCFC2Q9Y5Z7 792 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 PMS2P2O95744 297 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 CASP3P42574 277 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 SUB1P53999 127 aaKnown RBP eCLIP10.65□□□□□ -0.73e-6■□□□□ 9.7
VCL-202ENST00000372755 IL34Q6ZMJ4 242 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 GDF7Q7Z4P5 450 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 SLC7A5P1Q8MH63 180 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 LGI3Q8N145 548 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 GJC3Q8NFK1 279 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 SLC39A13Q96H72 371 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 HRASLS5Q96KN8 279 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 PLEKHF2Q9H8W4 249 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 ERVMER34-1Q9H9K5 563 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 DUSP13Q9UII6 198 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 FKBP2P26885 142 aaKnown RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 CSNK1EP49674 416 aaKnown RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 SNTB1Q13884 538 aaKnown RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 HES1Q14469 280 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 CDONQ4KMG0 1287 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 SOHLH1Q5JUK2 328 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms