RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 BRIX1Q8TDN6 353 aaKnown RBP8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 PIGCQ92535 297 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 HOXB13Q92826 284 aaPredicted RBP8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 FGGYQ96C11 551 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 C1QTNF6Q9BXI9 259 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 APMAPQ9HDC9 416 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 PLEKHJ1Q9NW61 149 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 RBFOX1Q9NWB1 397 aaKnown RBP8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 KCNN3Q9UGI6 736 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 KLHL21Q9UJP4 597 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 ZNF281Q9Y2X9 895 aa8.36□□□□□ -1.07
SMARCA1-202ENST00000371122 TMED7-TICAM2A0A0A6YYA0 188 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 GGT3PA6NGU5 568 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 OR2T1O43869 369 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 ADAM23O75077 832 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 HTR1FP30939 366 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 CD79BP40259 229 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 CLDN17P56750 224 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 KIAA1024LP59773 190 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 HSD11B2P80365 405 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 EFR3AQ14156 821 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 LYSMD4Q5XG99 296 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 KIRREL2Q6UWL6 708 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 ZNF620Q6ZNG0 422 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 ZNF417Q8TAU3 575 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 PIGTQ969N2 578 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 ZNF587Q96SQ5 575 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 PTDSS2Q9BVG9 487 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 EIF5A2Q9GZV4 153 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 EMC7Q9NPA0 242 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 TESQ9UGI8 421 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 MEMO1Q9Y316 297 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 TMED7Q9Y3B3 224 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 SIP14410 1827 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 EFCAB7A8K855 629 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 RAD51DO75771 328 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 HLA-AP01891 365 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 FPR3P25089 353 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 DRD3P35462 400 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 TNFRSF4P43489 277 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 TRAM1Q15629 374 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 MLF2Q15773 248 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 SLC25A35Q3KQZ1 300 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 RBM12BQ8IXT5 1001 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 ZNF440Q8IYI8 595 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 OR5H2Q8NGV7 314 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 DCUN1D4Q92564 292 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 MRPL38Q96DV4 380 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 C7orf50Q9BRJ6 194 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 PELOQ9BRX2 385 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 ASIC5Q9NY37 505 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 PLEKHB1Q9UF11 243 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 FAM221AA4D161 298 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 SRPX2O60687 465 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 CTNSO60931 367 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 TCRBP04435 133 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 ERCC1P07992 297 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 CD14P08571 375 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 SLC35E2P0CK97 266 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 COL9A1P20849 921 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 OMGP23515 440 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 PRKAR1BP31321 381 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 MRPS21P82921 87 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 OXA1LQ15070 435 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 DUSP6Q16828 381 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 PRTGQ2VWP7 1150 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 LRRC56Q8IYG6 542 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 SPAG16Q8N0X2 631 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 CLDN22Q8N7P3 220 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 LCORQ96JN0 433 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 GAREM1Q9H706 876 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 FAM60AQ9NP50 221 aa8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 UBE2J1Q9Y385 318 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-202ENST00000371122 IGHV3-15A0A0B4J1V0 119 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 OR7C1O76099 320 aaPredicted RBP8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 IFNGR1P15260 489 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 GDF1P27539 372 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 ACY1Q03154 408 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 DPTQ07507 201 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 ABHD17BQ5VST6 288 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 FAM199XQ6PEV8 388 aaPredicted RBP8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 UNQ6126/PRO20091Q6UXV3 157 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 IDO2Q6ZQW0 420 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 CALHM3Q86XJ0 350 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 OR56B4Q8NH76 319 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 ZNF707Q96C28 371 aaPredicted RBP8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 DDIT4LQ96D03 193 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 TCTN2Q96GX1 697 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 WWTR1Q9GZV5 400 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 PRDM7Q9NQW5 492 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 SLC7A11Q9UPY5 501 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 HIF3AQ9Y2N7 669 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 ALPK3Q96L96 1907 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 DOCK7Q96N67 2140 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 TRABD2BA6NFA1 517 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 ACOT7O00154 380 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 SYNGR4O95473 234 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 HBQ1P09105 142 aa8.34□□□□□ -1.07
SMARCA1-202ENST00000371122 HOXC8P31273 242 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms