RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 M0R3G1 203 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 UPK3AO75631 287 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 ZNF432O94892 652 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 ADAP00813 363 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 CD14P08571 375 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 GSTM3P21266 225 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 POU1F1P28069 291 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 SLC6A6P31641 620 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 ACVR1BP36896 505 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 DAPP51397 102 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 DAP3P51398 398 aaKnown RBP12.28□□□□□ -0.44
TPM3-211ENST00000368531 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
TPM3-211ENST00000368531 RUNX1T1Q06455 604 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 FAM27E3Q08E93 113 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 PHYHD1Q5SRE7 291 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 FBXW9Q5XUX1 488 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 RASSF6Q6ZTQ3 369 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 BEND4Q6ZU67 534 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 GPR137CQ8N3F9 429 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 SYT14Q8NB59 555 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 OR52L1Q8NGH7 329 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 OR6N1Q8NGY5 312 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 Q96M85 177 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 ERMAPQ96PL5 475 aaPredicted RBP12.28□□□□□ -0.44
TPM3-211ENST00000368531 TSPAN32Q96QS1 320 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 CIB1Q99828 191 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 IFT27Q9BW83 186 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 PLA2G12AQ9BZM1 189 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 TBC1D23Q9NUY8 699 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 GRHPRQ9UBQ7 328 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 RCE1Q9Y256 329 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 CDH10Q9Y6N8 788 aa12.28□□□□□ -0.44
TPM3-211ENST00000368531 CACNA1CQ13936 2221 aa12.27□□□□□ -0.44
TPM3-211ENST00000368531 PRSS44E7EML9 344 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 C19orf84I3L1E1 186 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 SOCS2O14508 198 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 MITFO75030 526 aaPredicted RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 TRMUO75648 421 aaKnown RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 ANPEPP15144 967 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 ACADSP16219 412 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 CDH2P19022 906 aaPredicted RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 CSNK1A1P48729 337 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 FOXG1P55316 489 aaPredicted RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 CLRN1P58418 232 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 MYBPC1Q00872 1141 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 COX10Q12887 443 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 SLC36A3Q495N2 470 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 SLC35F1Q5T1Q4 408 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 ARMC4Q5T2S8 1044 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 DPY19L2P2Q6ZN68 376 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 CXorf67Q86X51 503 aaPredicted RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 TMEM123Q8N131 208 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 OR8D4Q8NGM9 314 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 OR6X1Q8NH79 312 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 HDAC2Q92769 488 aaKnown RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 RNASE6Q93091 150 aaKnown RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 ZNF566Q969W8 418 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 RASD2Q96D21 266 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 LRRC46Q96FV0 321 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 ADAD1Q96M93 576 aaKnown RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 ZNF570Q96NI8 536 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 ALKBH3Q96Q83 286 aaPredicted RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 TSSK6Q9BXA6 273 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 PAPOLBQ9NRJ5 636 aaKnown RBP12.27□□□□□ -0.45
TPM3-211ENST00000368531 ASB6Q9NWX5 421 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 REV1Q9UBZ9 1251 aa12.27□□□□□ -0.45
TPM3-211ENST00000368531 ALPK2Q86TB3 2170 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 TEX13CA0A0J9YWL9 993 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 H7C1C5 153 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 ARHGEF9O43307 516 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 LYZL6O75951 148 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 CLDN1O95832 211 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 IGHMP01871 453 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 TP53P04637 393 aaPredicted RBP12.26□□□□□ -0.45
TPM3-211ENST00000368531 IGHV1-2P23083 117 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 NOS3P29474 1203 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 CD79BP40259 229 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 RPS6KA3P51812 740 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 LCN6P62502 163 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 ROR2Q01974 943 aaKnown RBP12.26□□□□□ -0.45
TPM3-211ENST00000368531 CD47Q08722 323 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 RPL13AP3Q6NVV1 102 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 FAHD1Q6P587 224 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 CD300LDQ6UXZ3 194 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 Q6ZT83 130 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 LINGO2Q7L985 606 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 C20orf196Q8IYI0 205 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 GABRG1Q8N1C3 465 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 IQCF1Q8N6M8 205 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 CLDN22Q8N7P3 220 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 POMGNT2Q8NAT1 580 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 TEX47Q8TBZ9 253 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 SLC25A44Q96H78 314 aaPredicted RBP12.26□□□□□ -0.45
TPM3-211ENST00000368531 NRIP3Q9NQ35 241 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 KRT84Q9NSB2 600 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 ELOVL5Q9NYP7 299 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 IL20Q9NYY1 176 aa12.26□□□□□ -0.45
TPM3-211ENST00000368531 CIB4A0PJX0 185 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 ZNF587BE7ETH6 402 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms