RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 NR2C2APQ86WQ0 139 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 CDC20BQ86Y33 519 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 TIGD4Q8IY51 512 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 RFLNBQ8N5W9 214 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 DUSP18Q8NEJ0 188 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 TRMT10AQ8TBZ6 339 aaKnown RBP12.69□□□□□ -0.38
USF1-202ENST00000368020 ASB17Q8WXJ9 295 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 FAM210AQ96ND0 272 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 FRMD6Q96NE9 622 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 SLITRK2Q9H156 845 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 SLC26A1Q9H2B4 701 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 RNF121Q9H920 327 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 SLC22A11Q9NSA0 550 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 LAMP5Q9UJQ1 280 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 NXT1Q9UKK6 140 aaKnown RBP12.69□□□□□ -0.38
USF1-202ENST00000368020 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
USF1-202ENST00000368020 CNOT1A5YKK6 2376 aaKnown RBP12.69□□□□□ -0.38
USF1-202ENST00000368020 IGHV5-10-1A0A0J9YXX1 117 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 A0A1W2PQM1 296 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 VSTM2BA6NLU5 285 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 LYRM1O43325 122 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 SCO2O43819 266 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 PRKCAP17252 672 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 MSX1P28360 303 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 APOBEC1P41238 236 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 HCCSP53701 268 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 PPP1R3BQ86XI6 285 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 ZNF248Q8NDW4 579 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 NFAM1Q8NET5 270 aaPredicted RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 ZPLD1Q8TCW7 415 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 ADAD1Q96M93 576 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 INTS14Q96SY0 518 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 PPIL3Q9H2H8 161 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 SDHAF3Q9NRP4 125 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 ZNF221Q9UK13 617 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 MEIOCA2RUB1 952 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 NPIPB13A6NJU9 1138 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 NPIPB4C9JG80 1138 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 NTN3O00634 580 aaPredicted RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 PLA2G10O15496 165 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 EPXP11678 715 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 EMP2P54851 167 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 RPS11P62280 158 aaKnown RBP eCLIP12.68□□□□□ -0.38
USF1-202ENST00000368020 CCL7P80098 99 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 RASGEF1BQ0VAM2 473 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 IL11RAQ14626 422 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 P2RY14Q15391 338 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 FAM27D1Q5T7N8 215 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 STPG1Q5TH74 334 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 FAM205BPQ63HN1 556 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 PIP4P1Q86T03 277 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 NLGN4YQ8NFZ3 816 aaPredicted RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 SMAP2Q8WU79 429 aaPredicted RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 ADAMTS14Q8WXS8 1223 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 RFT1Q96AA3 541 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 PTDSS2Q9BVG9 487 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 RTN4RQ9BZR6 473 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 COMMD4Q9H0A8 199 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 TAS2R5Q9NYW4 299 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 ZNF346Q9UL40 294 aaKnown RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 ATXN7L1Q9ULK2 861 aaPredicted RBP12.68□□□□□ -0.38
USF1-202ENST00000368020 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
USF1-202ENST00000368020 FAM240BA0A1B0GVZ2 78 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 PRSS37A4D1T9 235 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 HMX3A6NHT5 357 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 A6NIZ1 184 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 TMEM212A6NML5 194 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 B4DXG7 233 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 DVL2O14641 736 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 SSX4O60224 188 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 UBL3O95164 117 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 RAF1P04049 648 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 SRMP19623 302 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 CRABP1P29762 137 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 RAP1BP61224 184 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 RAP1AP62834 184 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 NHLH1Q02575 133 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 TRA2AQ13595 282 aaKnown RBP eCLIP12.67□□□□□ -0.38
USF1-202ENST00000368020 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
USF1-202ENST00000368020 TOMM34Q15785 309 aaPredicted RBP12.67□□□□□ -0.38
USF1-202ENST00000368020 COL28A1Q2UY09 1125 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 PAPD4Q6PIY7 484 aaKnown RBP12.67□□□□□ -0.38
USF1-202ENST00000368020 ADGRG3Q86Y34 549 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 OR5AK2Q8NH90 309 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 DUSP19Q8WTR2 217 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 ZNRF4Q8WWF5 429 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 CCDC74BQ96LY2 380 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 NEDD4LQ96PU5 975 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 OR14A2Q96R54 314 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 WACQ9BTA9 647 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 WDR54Q9H977 334 aa12.67□□□□□ -0.38
USF1-202ENST00000368020 SACM1LQ9NTJ5 587 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms