RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 POU3F4P49335 361 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 MC2RQ01718 297 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 NUDT18Q6ZVK8 323 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 HIST3H2AQ7L7L0 130 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 DND1Q8IYX4 353 aaKnown RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 JAGN1Q8N5M9 183 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CSNK1A1LQ8N752 337 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 FGF13Q92913 245 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 HIST1H2ACQ93077 130 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 LRRC46Q96FV0 321 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 KLHL15Q96M94 604 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 GFI1Q99684 422 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 TRPV4Q9HBA0 871 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 NPDC1Q9NQX5 325 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 PCDHB16Q9NRJ7 776 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 SLC39A1Q9NY26 324 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 HAO2Q9NYQ3 351 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 EMC3Q9P0I2 261 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 LRIT1Q9P2V4 623 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CHRNA9Q9UGM1 479 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ARHGEF17Q96PE2 2063 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 DCDC2BA2VCK2 349 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 MFSD2BA6NFX1 497 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CTDSPLO15194 276 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CTNSO60931 367 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 EGFP01133 1207 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 APEHP13798 732 aaKnown RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 VAMP1P23763 118 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 GJA4P35212 333 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 GPR143P51810 404 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 LUMP51884 338 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 EFNB2P52799 333 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 PPP2CBP62714 309 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 PPP2CAP67775 309 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ALKBH1Q13686 389 aaKnown RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 ALG10Q5BKT4 473 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 OR7E24Q6IFN5 339 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 RGS7BPQ6MZT1 257 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 ATRAIDQ6UW56 229 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 DGAT2L6Q6ZPD8 337 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ZNF550Q7Z398 422 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CD163Q86VB7 1156 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 FRMD1Q8N878 549 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 TMEM185AQ8NFB2 350 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 MIB2Q96AX9 1013 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 MYADMQ96S97 322 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 POFUT1Q9H488 388 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 Q9N2J8 555 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ACTR10Q9NZ32 417 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 FBXO4Q9UKT5 387 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 PLCL2Q9UPR0 1127 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ENTPD2Q9Y5L3 495 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 AUP1Q9Y679 476 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 MPDZO75970 2070 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 A0A0A6YYC8 382 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 D6RAR5 112 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 I3L1I5 382 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 APODP05090 189 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 GABRA1P14867 456 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 SKP1P63208 163 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 MAT1AQ00266 395 aaKnown RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 GPR18Q14330 331 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 TANGO2Q6ICL3 276 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 TMEM88Q6PEY1 159 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 KCTD9Q7L273 389 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CMIPQ8IY22 773 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 SPICQ8N5J4 248 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 CHST4Q8NCG5 386 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 NPEPL1Q8NDH3 523 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 OR1E3Q8WZA6 343 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 OR2A5Q96R48 311 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 KXD1Q9BQD3 176 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ZNF416Q9BWM5 594 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 RSPH9Q9H1X1 276 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 SYT4Q9H2B2 425 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 DNAJB12Q9NXW2 375 aaKnown RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 RABL2AQ9UBK7 228 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 MLXQ9UH92 298 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 ZNF230Q9UIE0 474 aaPredicted RBP7.47□□□□□ -1.21
CD46-208ENST00000367042 FBXL21Q9UKT6 434 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 KLHDC2Q9Y2U9 406 aa7.47□□□□□ -1.21
CD46-208ENST00000367042 SPEGQ15772 3267 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 PRR32B1ATL7 298 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 PRAMEF2O60811 474 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 GLCEO94923 617 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 RAB3DO95716 219 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 SPARCP09486 303 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 AKAIN1P0CW23 69 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 PBX2P40425 430 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 MRPS10P82664 201 aaKnown RBP7.46□□□□□ -1.21
CD46-208ENST00000367042 ILF3Q12906 894 aaKnown RBP eCLIP7.46□□□□□ -1.211e-9■■■□□ 16.6
CD46-208ENST00000367042 RUNX3Q13761 415 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 ELFN2Q5R3F8 820 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 PRAMEF17Q5VTA0 474 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 B3GNTL1Q67FW5 361 aaPredicted RBP7.46□□□□□ -1.21
CD46-208ENST00000367042 ARMC6Q6NXE6 501 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 LRFN4Q6PJG9 635 aa7.46□□□□□ -1.21
CD46-208ENST00000367042 DPY19L2P2Q6ZN68 376 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms