RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 RADILQ96JH8 1075 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PTCHD1Q96NR3 888 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ALOXE3Q9BYJ1 711 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 GSX2Q9BZM3 304 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC25A32Q9H2D1 315 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PLEKHA3Q9HB20 300 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 UBQLN4Q9NRR5 601 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CPNE7Q9UBL6 633 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF629Q9UEG4 869 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 DAPP1Q9UN19 280 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NPIPA1Q9UND3 350 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF587BE7ETH6 402 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SURF4O15260 269 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TNFSF12O43508 249 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NID1P14543 1247 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRSS3P35030 304 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ADAM5Q6NVV9 412 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR6M1Q8NGM8 313 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 RSC1A1Q92681 617 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 DPF1Q92782 380 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CORO2AQ92828 525 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NXPE3Q969Y0 559 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TCTN2Q96GX1 697 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM68Q96MH6 324 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CHST8Q9H2A9 424 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC17A4Q9Y2C5 497 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF175Q9Y473 711 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TCRBV21S2A2A0A5A6 115 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF860A6NHJ4 632 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF850A8MQ14 1090 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRRT4C9JH25 899 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 K7ESM1 405 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR2T1O43869 369 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 GREM1O60565 184 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CTNSO60931 367 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR2C1O95371 312 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PAPLNO95428 1278 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF44P15621 663 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NME2P22392 152 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CCKBRP32239 447 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PDX1P52945 283 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 FOXK2Q01167 660 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 AARDQ4LEZ3 155 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 WBP2NLQ6ICG8 309 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC18B1Q6NT16 456 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 DPY19L4Q7Z388 723 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 IL17RDQ8NFM7 739 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ASB17Q8WXJ9 295 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC35A4Q96G79 324 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 DCLRE1CQ96SD1 692 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SRRQ9GZT4 340 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 UBQLN3Q9H347 655 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 C12orf10Q9HB07 376 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 MBNL1Q9NR56 388 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 RASD1Q9Y272 281 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF281Q9Y2X9 895 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 A6NIZ1 184 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 LILRB5O75023 590 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TOX4O94842 621 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CALCBP10092 127 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NME1P15531 152 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 EVX1P49640 407 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAP1BP61224 184 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ACSM1Q08AH1 577 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZIC1Q15915 447 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NKPD1Q17RQ9 610 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 MCATQ8IVS2 390 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 YIPF5Q969M3 257 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SHDQ96IW2 340 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 BTF3L4Q96K17 158 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 MSLNLQ96KJ4 702 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF587Q96SQ5 575 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TEAD3Q99594 435 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CMKLR1Q99788 373 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SPHK1Q9NYA1 384 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 APOBEC3BQ9UH17 382 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CBLCQ9ULV8 474 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 UBE2J1Q9Y385 318 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 LGALS8O00214 317 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NCR1O76036 304 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 BAGE3Q86Y29 109 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 BAGE2Q86Y30 109 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 GPR32P1Q8NGA4 272 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM121BQ9BXQ6 578 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC6A17Q9H1V8 727 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 LIN7BQ9HAP6 207 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ETV7Q9Y603 341 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ANKUB1A6NFN9 424 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 FRS3O43559 492 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 F10P00742 488 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PAX6P26367 422 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 EEF1A2Q05639 463 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 EMC4Q5J8M3 183 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SFXN4Q6P4A7 337 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 WDR88Q6ZMY6 472 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 DBX2Q6ZNG2 339 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 HMGN2P46Q86SG4 172 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PLXDC1Q8IUK5 500 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NKAIN4Q8IVV8 208 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms