RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ZNF610Q8N9Z0 462 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ATG16L2Q8NAA4 619 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 OR52L1Q8NGH7 329 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RNASE6Q93091 150 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF566Q969W8 418 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 OR2M2Q96R28 347 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 PKP2Q99959 881 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 RBM24Q9BX46 236 aaKnown RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 UCK2Q9BZX2 261 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 OPN3Q9H1Y3 402 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 OR52D1Q9H346 318 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 SLC24A3Q9HC58 644 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 B3GAT2Q9NPZ5 323 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 ASB6Q9NWX5 421 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 BAIAP2Q9UQB8 552 aa12.23□□□□□ -0.45
NSMCE1-201ENST00000361439 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 TXNDC12O95881 172 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 F13BP05160 661 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 POU2F1P14859 743 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF26P17031 533 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 SDHAP31040 664 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 CD79BP40259 229 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 SELENOPP49908 381 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 BIDP55957 195 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 FXYD6P3P58550 94 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 ELF3P78545 371 aaPredicted RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 TGFBR3Q03167 851 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 ARMC4Q5T2S8 1044 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 LUZP2Q86TE4 346 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 MEX3DQ86XN8 651 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 C20orf196Q8IYI0 205 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 ARIH2OSQ8N7S6 290 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 ASB10Q8WXI3 467 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 GTPBP3Q969Y2 492 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 BOD1Q96IK1 185 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 TXNDC15Q96J42 360 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 NIPSNAP1Q9BPW8 284 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 RBM4BQ9BQ04 359 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 KATNB1Q9BVA0 655 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 POLDIP3Q9BY77 421 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 MRPL13Q9BYD1 178 aaKnown RBP12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 SEMA6AQ9H2E6 1030 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 DCLRE1BQ9H816 532 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 MED29Q9NX70 200 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 KIF17Q9P2E2 1029 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 GRHPRQ9UBQ7 328 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 UPB1Q9UBR1 384 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 OAZ3Q9UMX2 235 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 POFUT2Q9Y2G5 429 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 GPR52Q9Y2T5 361 aa12.22□□□□□ -0.45
NSMCE1-201ENST00000361439 USP9YO00507 2555 aaPredicted RBP12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF587BE7ETH6 402 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 PDLIM1O00151 329 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 SERPINI2O75830 405 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 KRT33AO76009 404 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 PGA4P0DJD7 388 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 PGA3P0DJD8 388 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 OSMP13725 252 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 ACADSP16219 412 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 COX5AP20674 150 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 PRKACGP22612 351 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 MPGP29372 298 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 DAPP51397 102 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 SH3BGRP55822 239 aaPredicted RBP12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 ITGADQ13349 1161 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 CDSNQ15517 529 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 HIST3H3Q16695 136 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 TSPO2Q5TGU0 170 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 KDM4DQ6B0I6 523 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 KLHL17Q6TDP4 642 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 FAM122BQ7Z309 247 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 ADCK1Q86TW2 530 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 HS3ST5Q8IZT8 346 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 UBE2J2Q8N2K1 259 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 GPR137CQ8N3F9 429 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF519Q8TB69 540 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 TMEM54Q969K7 222 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 TSPAN32Q96QS1 320 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 C9orf16Q9BUW7 83 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 SMURF2Q9HAU4 748 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 C8orf4Q9NR00 106 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 PAPOLBQ9NRJ5 636 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 SLC7A10Q9NS82 523 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 GALNT8Q9NY28 637 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 TAS2R16Q9NYV7 291 aa12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 ZNF346Q9UL40 294 aaKnown RBP12.21□□□□□ -0.45
NSMCE1-201ENST00000361439 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 NKX2-6A6NCS4 301 aa12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 C16orf97H3BN30 126 aa12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 XKRYO14609 159 aa12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 MGRN1O60291 552 aa12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 RNF224P0DH78 156 aa12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 PPP3CBP16298 524 aa12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 PAX7P23759 505 aa12.2□□□□□ -0.46
NSMCE1-201ENST00000361439 CSNK1A1P48729 337 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms