RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SLC23A1Q9UHI7 598 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 NPFFR2Q9Y5X5 522 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 CENPVL1A0A0U1RR11 272 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 E9PI62 339 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 BRINP1O60477 761 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 SCGNO76038 276 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 FGF9P31371 208 aaPredicted RBP11.24□□□□□ -0.61
COL20A1-201ENST00000358894 DEFA6Q01524 100 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 LTBQ06643 244 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 CDNFQ49AH0 187 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 PAN3Q58A45 887 aaKnown RBP11.24□□□□□ -0.61
COL20A1-201ENST00000358894 METTL11BQ5VVY1 283 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 LIPNQ5VXI9 398 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 SLC6A19Q695T7 634 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 MRM1Q6IN84 353 aaKnown RBP11.24□□□□□ -0.61
COL20A1-201ENST00000358894 CD300LDQ6UXZ3 194 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 FBXW5Q969U6 566 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 MED18Q9BUE0 208 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 PPP4R1LQ9P1A2 415 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 CASP8AP2Q9UKL3 1982 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 EFCAB7A8K855 629 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 UTS2O95399 124 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 ITGA5P08648 1049 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 PGAM2P15259 253 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 SRMP19623 302 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 BEST3Q8N1M1 668 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 OR56B4Q8NH76 319 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 THRSPQ92748 146 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 FAM46BQ96A09 425 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 ST6GAL2Q96JF0 529 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 OR2M2Q96R28 347 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 SLC6A7Q99884 636 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF768Q9H5H4 540 aaKnown RBP11.24□□□□□ -0.61
COL20A1-201ENST00000358894 SIGLEC7Q9Y286 467 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 HCRTR1O43613 425 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF217O75362 1048 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 CT62P0C5K7 136 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 RAB2AP61019 212 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 TLE3Q04726 772 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 SPOCK1Q08629 439 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 AIMP2Q13155 320 aaKnown RBP11.24□□□□□ -0.61
COL20A1-201ENST00000358894 GPR50Q13585 617 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 OR7A5Q15622 319 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 SFTPA2Q8IWL1 248 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 RDH10Q8IZV5 341 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 TMEM156Q8N614 296 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 DUSP19Q8WTR2 217 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 DERL3Q96Q80 235 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 DDOQ99489 341 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 HCAR1Q9BXC0 346 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 BCL2L14Q9BZR8 327 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 TSPAN10Q9H1Z9 355 aaPredicted RBP11.24□□□□□ -0.61
COL20A1-201ENST00000358894 GSKIPQ9P0R6 139 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 V9GYH0 126 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 PTPRDP23468 1912 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 C2orf72A6NCS6 295 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 SPI1P17947 270 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 PSMB1P20618 241 aaKnown RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 HTR2AP28223 471 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 FLI1Q01543 452 aaPredicted RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF283Q8N7M2 679 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 OR4C3Q8NH37 302 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 LILRB1Q8NHL6 650 aaPredicted RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 WDFY2Q96P53 400 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 SDHAF2Q9NX18 166 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 ING1Q9UK53 422 aaPredicted RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF175Q9Y473 711 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 A0A087WV62 115 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 VSTM2BA6NLU5 285 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 TGM6O95932 706 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 SLC6A8P48029 635 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 CLRN1P58418 232 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 GLO1Q04760 184 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF79Q15937 498 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 AANATQ16613 207 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 C17orf47Q8NEP4 570 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 BMFQ96LC9 184 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 DCLRE1CQ96SD1 692 aaKnown RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 TDRD6O60522 2096 aaKnown RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF593O00488 134 aaPredicted RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 DNAJB6O75190 326 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 CELA2BP08218 269 aaPredicted RBP11.23□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF35P13682 527 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 CTRB1P17538 263 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 CD1CP29017 333 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 SFTPDP35247 375 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 GFERP55789 205 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 RIPPLY1Q0D2K3 151 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 SGCAQ16586 387 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 Q499Y3 187 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 CTRB2Q6GPI1 263 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 BCORP1Q8N888 145 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 OR51D1Q8NGF3 324 aa11.23□□□□□ -0.61
COL20A1-201ENST00000358894 GIMAP5Q96F15 307 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms