RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 UFC1Q9Y3C8 167 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 KCNK2O95069 426 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 GLRA1P23415 457 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 TRIM23P36406 574 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 TPPP2P59282 170 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 RAB41Q5JT25 222 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 OPN5Q6U736 354 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 METAP1DQ6UB28 335 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 ZNF551Q7Z340 670 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 SGMS2Q8NHU3 365 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 TMEM40Q8WWA1 233 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 FUBP1Q96AE4 644 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 MRAP2Q96G30 205 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 C12orf42Q96LP6 360 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 CCM2LQ9NUG4 571 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 OARD1Q9Y530 152 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 UBE2L6O14933 153 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 SMAD7O15105 426 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 SCAMP2O15127 329 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 GPR32O75388 356 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 LYZL6O75951 148 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 SLC35E2BP0CK96 405 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 GPR12P47775 334 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 IRF4Q15306 451 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 RTP2Q5QGT7 225 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 OR4D10Q8NGI6 311 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 SHISA4Q96DD7 197 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 PLPPR2Q96GM1 343 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 FCRL3Q96P31 734 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 C16orf70Q9BSU1 422 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 SMOC2Q9H3U7 446 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 CBLCQ9ULV8 474 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 IGKV3D-15A0A087WSY6 115 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 IGKV3OR2-268A0A0C4DH90 116 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 PRSS38A1L453 326 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 IGKV3-15P01624 115 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 LYRM7Q5U5X0 104 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 NADSYN1Q6IA69 706 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 OR6V1Q8N148 313 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 NHLRC2Q8NBF2 726 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 NT5C3BQ969T7 300 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 PIGQQ9BRB3 760 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 DERL2Q9GZP9 239 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 ISYNA1Q9NPH2 558 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 PAQR5Q9NXK6 330 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 PTTG2Q9NZH5 202 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 SLC22A2O15244 555 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 COX7A2P2O60397 106 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 OR7C2O60412 319 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 MMP7P09237 267 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 HLCSP50747 726 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 TEX26Q8N6G2 289 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 WDR83Q9BRX9 315 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 YTHDF2Q9Y5A9 579 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 MEX3AA1L020 520 aaKnown RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 C5orf52A6NGY3 159 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 FOXE1O00358 373 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 CD70P32970 193 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 TAZQ16635 292 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 CHST14Q8NCH0 376 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 ACY3Q96HD9 319 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 ST6GALNAC4Q9H4F1 302 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 MTHFD2LQ9H903 347 aaPredicted RBP9.06□□□□□ -0.96
CHD3-202ENST00000358181 TAAR2Q9P1P5 351 aa9.06□□□□□ -0.96
CHD3-202ENST00000358181 MYH1P12882 1939 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 MYH4Q9Y623 1939 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 IGHV3-15A0A0B4J1V0 119 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 TRAPPC13A5PLN9 417 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 USF1P22415 310 aaPredicted RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 CEACAM7Q14002 265 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SLC22A10Q63ZE4 541 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SYT9Q86SS6 491 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 CMTM4Q8IZR5 234 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 OR5M8Q8NGP6 311 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 IL22RA2Q969J5 263 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 C4orf36Q96KX1 117 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ZNF582Q96NG8 517 aaPredicted RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 MYADMQ96S97 322 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 VIRMAQ69YN4 1812 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 AQP9O43315 295 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ADAM20O43506 726 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SULT1C4O75897 302 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 GCGP01275 180 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 MMP2P08253 660 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 CYB561P49447 251 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 PSMB3P49720 205 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ELAVL3Q14576 367 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 RTP5Q14D33 572 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SFT2D3Q587I9 215 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ACOT7LQ6ZUV0 252 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 UBE2FQ969M7 185 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ELMOD3Q96FG2 381 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SIRT5Q9NXA8 310 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 DOK5Q9P104 306 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 LIPT1Q9Y234 373 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 IGKV3D-11A0A0A0MRZ8 115 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 P2RY10O00398 339 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SRPX2O60687 465 aaPredicted RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 IGKV3-11P04433 115 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms