RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 WBP2NLQ6ICG8 309 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 LRRC75AQ8NAA5 344 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 RCBTB1Q8NDN9 531 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 OR4N2Q8NGD1 307 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 KLHL15Q96M94 604 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 AIFM2Q9BRQ8 373 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 DUX4Q9UBX2 424 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 MRPS33Q9Y291 106 aaKnown RBP16.12■□□□□ 0.17
RTN4-204ENST00000357732 XIRP2A4UGR9 3374 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 TICRRQ7Z2Z1 1910 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 GGT3PA6NGU5 568 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 PRR32B1ATL7 298 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 F5H5P2 479 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 H0Y8X5 98 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 K7EQS6 105 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 OR8G3PP0DMU2 310 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 CSF2RBP32927 897 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 MAP2K6P52564 334 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 GK2Q14410 553 aaPredicted RBP16.12■□□□□ 0.17
RTN4-204ENST00000357732 ZNF74Q16587 644 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 OR2AK2Q8NG84 335 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 CCDC3Q9BQI4 270 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 GINS4Q9BRT9 223 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 CAPN10Q9HC96 672 aa16.12■□□□□ 0.17
RTN4-204ENST00000357732 A0A1B0GVT2 93 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 TMEM72A0PK05 275 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 ELOA3DA6NLF2 546 aaPredicted RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 OR4C45A6NMZ5 311 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 GNB5O14775 395 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 FGF2P09038 288 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 AKAIN1P0CW23 69 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 SDHBP21912 280 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 RPS15P62841 145 aaKnown RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 ELOA3BQ3SY89 546 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 FAM122CQ6P4D5 195 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 NPSR1Q6W5P4 371 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 ELOA3Q8NG57 546 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 OR4C16Q8NGL9 310 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 TSACCQ96A04 125 aaPredicted RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 Q96M85 177 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 YBX2Q9Y2T7 364 aaKnown RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 TRANK1O15050 2925 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 IGKV1D-42A0A075B6H8 117 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 RASGRP1O95267 797 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 RPA2P15927 270 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 NAGAP17050 411 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 CCINQ13939 588 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 ALG10Q5BKT4 473 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 FDX2Q6P4F2 183 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 GSG1LQ6UXU4 331 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 RPP25Q9BUL9 199 aaKnown RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 TTYH1Q9H313 450 aaPredicted RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 WDR76Q9H967 626 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 EXOSC3Q9NQT5 275 aaKnown RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 LAMP5Q9UJQ1 280 aa16.11■□□□□ 0.17
RTN4-204ENST00000357732 CDV3Q9UKY7 258 aaKnown RBP16.11■□□□□ 0.17
RTN4-204ENST00000357732 ATG2BQ96BY7 2078 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 TRIM77I1YAP6 450 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 RDH16O75452 317 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 VSIG10L2P0DP72 767 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 LSSP48449 732 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 YPEL5P62699 121 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 UBXN2BQ14CS0 331 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 STPG1Q5TH74 334 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 FAAP20Q6NZ36 180 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 TMEM81Q6P7N7 255 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 CDH26Q8IXH8 852 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 ZNF511Q8NB15 262 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 LSM14AQ8ND56 463 aaKnown RBP16.1■□□□□ 0.17
RTN4-204ENST00000357732 OR2G2Q8NGZ5 317 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 EDAQ92838 391 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 MCHR2Q969V1 340 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 LINC00052Q96N35 136 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 UPB1Q9UBR1 384 aa16.1■□□□□ 0.17
RTN4-204ENST00000357732 SULT1C2O00338 296 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ARPC5O15511 151 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 CDC40O60508 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
RTN4-204ENST00000357732 RPP14O95059 124 aaKnown RBP16.09■□□□□ 0.17
RTN4-204ENST00000357732 WDPCPO95876 746 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 CT45A8P0DMV1 189 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 CT45A9P0DMV2 189 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 RNH1P13489 461 aaKnown RBP16.09■□□□□ 0.17
RTN4-204ENST00000357732 CSRP2Q16527 193 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 KLHL26Q53HC5 615 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 CT45A2Q5DJT8 189 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 TMEM196Q5HYL7 178 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ATG4DQ86TL0 474 aaPredicted RBP16.09■□□□□ 0.17
RTN4-204ENST00000357732 OOSP2Q86WS3 158 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ARHGEF39Q8N4T4 335 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 OR6K3Q8NGY3 331 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 CCDC107Q8WV48 283 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ARL6Q9H0F7 186 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 IGFLR1Q9H665 355 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 PSMD9O00233 223 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 SRPX2O60687 465 aaPredicted RBP16.09■□□□□ 0.17
RTN4-204ENST00000357732 CTAG2O75638 210 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ASAH2BP0C7U1 165 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 PVRP15151 417 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms