RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 OLIG3Q7RTU3 272 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 FGD2Q7Z6J4 655 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 ADGRG3Q86Y34 549 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 OR8S1Q8NH09 359 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 TOR3AQ9H497 397 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 CYSLTR2Q9NS75 346 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 MYRFQ9Y2G1 1151 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 DSPPQ9NZW4 1301 aa8.24□□□□□ -1.09
UPF2-202ENST00000357604 H0YAE9 185 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 GSG1Q2KHT4 349 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 LINC00303Q3SY05 128 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 BEX5Q5H9J7 111 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 NUFIP2Q7Z417 695 aaKnown RBP8.23□□□□□ -1.09
UPF2-202ENST00000357604 TUSC5Q8IXB3 177 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 GCNT2Q8N0V5 402 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 WDSUB1Q8N9V3 476 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 RNF122Q9H9V4 155 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
UPF2-202ENST00000357604 LOC100130705A0A1B0GUX0 176 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 SH3D21A4FU49 640 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 J3KTA2 159 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 PLPP3O14495 311 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 TLX2O43763 284 aaPredicted RBP8.23□□□□□ -1.09
UPF2-202ENST00000357604 CYTIPO60759 359 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 ENTPD1P49961 510 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 RPL18Q07020 188 aaKnown RBP8.23□□□□□ -1.09
UPF2-202ENST00000357604 APOFQ13790 326 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 PRSS53Q2L4Q9 553 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 CLDN22Q8N7P3 220 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 NUDT8Q8WV74 236 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 CRELD1Q96HD1 420 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 LRR1Q96L50 414 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 SNX18Q96RF0 628 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 MND1Q9BWT6 205 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 OR10A4Q9H209 315 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 TRIM36Q9NQ86 728 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 C14orf119Q9NWQ9 140 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 SLCO1C1Q9NYB5 712 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 H0YJX3 145 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 GLSO94925 669 aaPredicted RBP8.23□□□□□ -1.09
UPF2-202ENST00000357604 LAP3P28838 519 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 CD97P48960 835 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 GFOD2Q3B7J2 385 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 FAM209AQ5JX71 171 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 ADGRG5Q8IZF4 528 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 ARIH2OSQ8N7S6 290 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 TMEM99Q8N816 258 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 NTNG2Q96CW9 530 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 KTI12Q96EK9 354 aaPredicted RBP8.23□□□□□ -1.09
UPF2-202ENST00000357604 GPER1Q99527 375 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 GLTPQ9NZD2 209 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 NDUFAF4Q9P032 175 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 OAZ3Q9UMX2 235 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 DHHO43323 396 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 LCATP04180 440 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 FABP6P51161 128 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 DUSP7Q16829 419 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 LRRC18Q8N456 261 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 TMEM163Q8TC26 289 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 TMEM80Q96HE8 168 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 FOXB1Q99853 325 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 FAM192AQ9GZU8 254 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 ADAM19Q9H013 955 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 FN3KQ9H479 309 aa8.23□□□□□ -1.09
UPF2-202ENST00000357604 A0A1W2PNV4 684 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 OR6C6A6NF89 314 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 DOK2O60496 412 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 SS18L1O75177 396 aaPredicted RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 EDNRAP25101 427 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 SCGB2A2Q13296 93 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 KCNJ8Q15842 424 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 ZNF704Q6ZNC4 412 aaPredicted RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 MSRB3Q8IXL7 192 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 BPIFB6Q8NFQ5 453 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 FAM222BQ8WU58 562 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 IL4I1Q96RQ9 567 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 GABARAPL1Q9H0R8 117 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 GNG8Q9UK08 70 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 CMAHPQ9Y471 501 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 TRBV5-3A0A0A0MS03 114 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 SLC35F4A4IF30 521 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 PRODHO43272 600 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 BCAS1O75363 584 aaPredicted RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 RBM48Q5RL73 367 aaKnown RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 ZNF775Q96BV0 537 aaPredicted RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 FEVQ99581 238 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 CACNA1IQ9P0X4 2223 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 TAF4O00268 1085 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 EI24O14681 340 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 BGLAPP02818 100 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 SSTR2P30874 369 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 OR3A2P47893 321 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 SERPINB10P48595 397 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 CNN3Q15417 329 aaKnown RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 ACKR1Q16570 336 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 CMPK2Q5EBM0 449 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 RGS7BPQ6MZT1 257 aaPredicted RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 SDR9C7Q8NEX9 313 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 RAB9BQ9NP90 201 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 PRSS37A4D1T9 235 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms