RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 C15orf39Q6ZRI6 1047 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 Q6ZTK2 550 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF367Q7RTV3 350 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 POC1BQ8TC44 478 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 SLC41A2Q96JW4 573 aa6.77□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF346Q9UL40 294 aaKnown RBP6.77□□□□□ -1.33
VPS13A-202ENST00000357409 PRPS1P60891 318 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ACSM6Q6P461 480 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CNIH2Q6PI25 160 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZFP82Q8N141 532 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CDX2Q99626 313 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CNOT11Q9UKZ1 510 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZFP92A6NM28 416 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF814B7Z6K7 855 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 KLRC4-KLRK1H3BQV0 150 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CNN3Q15417 329 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 HSD17B11Q8NBQ5 300 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR10G3Q8NGC4 313 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZUFSPQ96AP4 578 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 DPH3Q96FX2 82 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZBED3Q96IU2 234 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 HEYLQ9NQ87 328 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 PRDM4Q9UKN5 801 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 HTR2BP41595 481 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CSNK1G2P78368 415 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SPANXN5Q5MJ07 72 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR2Z1Q8NG97 314 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR13J1Q8NGT2 312 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 RHEBL1Q8TAI7 183 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR51E1Q8TCB6 317 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 BCL7BQ9BQE9 202 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SLC23A1Q9UHI7 598 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 DPM1O60762 260 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 WDR1O75083 606 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 HNRNPFP52597 415 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 YTHDF3Q7Z739 585 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR11L1Q8NGX0 322 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 METTL9Q9H1A3 318 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 NGBQ9NPG2 151 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 NOX4Q9NPH5 578 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SEC14L4Q9UDX3 406 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CLEC2DQ9UHP7 191 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 MAB21L2Q9Y586 359 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 GFYI3L273 518 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CTDSP2O14595 271 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CRXO43186 299 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 KITLGP21583 273 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 MANEALQ5VSG8 457 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CHDHQ8NE62 594 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR10X1Q8NGY0 326 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 PIGQQ9BRB3 760 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 PLA2G12AQ9BZM1 189 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 MRPS28Q9Y2Q9 187 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZC3H13Q5T200 1668 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CDHR4A6H8M9 788 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SLC6A8P48029 635 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 UBE2IP63279 158 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 FAM213BQ8TBF2 198 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SLC39A7Q92504 469 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SLC38A1Q9H2H9 487 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SEMA6CQ9H3T2 930 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 GDE1Q9NZC3 331 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 SERGEFQ9UGK8 458 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR2T1O43869 369 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 APOA2P02652 100 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 GGT1P19440 569 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 PPP1CAP62136 330 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 DOC2BQ14184 412 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 DUSP6Q16828 381 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 TBC1D28Q2M2D7 210 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 TCTN1Q2MV58 587 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 MEPCEQ7L2J0 689 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZFP62Q8NB50 900 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR8J3Q8NGG0 315 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR6T1Q8NGN1 323 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 NAT6Q93015 286 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CDCA3Q99618 268 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 GAL3ST2Q9H3Q3 398 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 CCM2LQ9NUG4 571 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 UBQLN2Q9UHD9 624 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 MRPS18BQ9Y676 258 aaKnown RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 A0A0B4J203 849 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 FCMRO60667 390 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ITGBL1O95965 494 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 TFP02787 698 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 OR13C7P0DN81 318 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 GPX3P22352 226 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ATP1B3P54709 279 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ARRDC2Q8TBH0 407 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF300Q96RE9 604 aaPredicted RBP6.76□□□□□ -1.33
VPS13A-202ENST00000357409 TBCCD1Q9NVR7 557 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 NAGKQ9UJ70 344 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 ENTPD2Q9Y5L3 495 aa6.76□□□□□ -1.33
VPS13A-202ENST00000357409 BTBD17A6NE02 478 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 SERINC4A6NH21 518 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 BHLHE40O14503 412 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 TRAF3IP2O43734 574 aaPredicted RBP6.75□□□□□ -1.33
VPS13A-202ENST00000357409 GABRB3P28472 473 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 OPRL1P41146 370 aa6.75□□□□□ -1.33
VPS13A-202ENST00000357409 EIF5AP63241 154 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms