RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TMEM88Q6PEY1 159 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 ZCCHC4Q9H5U6 513 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 PARD6AQ9NPB6 346 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 DUSP3P51452 185 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 GNB1P62873 340 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 CTSL3PQ5NE16 218 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 WBP2NLQ6ICG8 309 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 TMEM123Q8N131 208 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 PGAP3Q96FM1 320 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 SLC22A11Q9NSA0 550 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 EMC9Q9Y3B6 208 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 RGPD2P0DJD1 1756 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 POU3F1Q03052 451 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 TMEM184AQ6ZMB5 413 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 PLXDC1Q8IUK5 500 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 KDF1Q8NAX2 398 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 MZB1Q8WU39 189 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 ISYNA1Q9NPH2 558 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 SNX11Q9Y5W9 270 aa10.24□□□□□ -0.77
GTF3C1-201ENST00000356183 F10P00742 488 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 NAT1P18440 290 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 ACKR3P25106 362 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 PMPCAQ10713 525 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 ADPRMQ3LIE5 342 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 MAVSQ7Z434 540 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 MRPL10Q7Z7H8 261 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 CDH26Q8IXH8 852 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 C11orf42Q8N5U0 333 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SLC35G3Q8N808 338 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 EIF3FO00303 357 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 ADAM23O75077 832 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 COMMD1Q8N668 190 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 PIGMQ9H3S5 423 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 CBLCQ9ULV8 474 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SPO11Q9Y5K1 396 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 KPTNQ9Y664 436 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 A0A0A6YYC8 382 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 I3L1I5 382 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 MMP2P08253 660 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SCGB1C2P0DMR2 95 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 NAGAP17050 411 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 CHRNB4P30926 498 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 CD70P32970 193 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 UBE2IP63279 158 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 CST6Q15828 149 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 GLCCI1Q86VQ1 547 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 CHST14Q8NCH0 376 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SLC7A6Q92536 515 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 PSORS1C1Q9UIG5 152 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 KLK4Q9Y5K2 254 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SNCAP37840 140 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 MTNR1BP49286 362 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 OR10A3P58181 314 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SYT6Q5T7P8 510 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 ACOT4Q8N9L9 421 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 PLPP7Q8NBV4 271 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 OR5M11Q96RB7 305 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 ADOQ96SZ5 270 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 ANTXRLA6NF34 631 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 G3V3Q6 166 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 STC2O76061 302 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 PMS2P2O95744 297 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 OPRD1P41143 372 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 CLDN17P56750 224 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 UBE2G1P62253 170 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 MCTS1Q9ULC4 181 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 WIF1Q9Y5W5 379 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 PRSS21Q9Y6M0 314 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 K7EQM0 130 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 TNFRSF17Q02223 184 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 MRPL2Q5T653 305 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 ABHD17BQ5VST6 288 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 OR51S1Q8NGJ8 323 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 KHSRPQ92945 711 aaKnown RBP eCLIP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 FGGYQ96C11 551 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SLC39A13Q96H72 371 aa10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SPATA6Q9NWH7 488 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 GAR1Q9NY12 217 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-201ENST00000356183 SOD2P04179 222 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 HCCSP53701 268 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 DHRS4L2Q6PKH6 230 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 RETREG3Q86VR2 466 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 UMODL1-AS1Q8N2C9 162 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 MDGA1Q8NFP4 955 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 DHRS9Q9BPW9 319 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SSSCA1O60232 199 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SPI1P17947 270 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 FOLR3P41439 243 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 HTR3AP46098 478 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SNTB1Q13884 538 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SERTAD2Q14140 314 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 ZNF620Q6ZNG0 422 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 LINC00346Q8IVM7 164 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 H1FXQ92522 213 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 DDOQ99489 341 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 LMF2Q9BU23 707 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 TAS2R5Q9NYW4 299 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 GMPR2Q9P2T1 348 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms