RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PCNPQ8WW12 178 aaKnown RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 H1FXQ92522 213 aaKnown RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 INSM2Q96T92 566 aaPredicted RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 VPS25Q9BRG1 176 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 UTP23Q9BRU9 249 aaKnown RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 EXO1Q9UQ84 846 aaKnown RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 TMED7-TICAM2A0A0A6YYA0 188 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 A0A1W2PPH5 198 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 ZNF814B7Z6K7 855 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 TIMP1P01033 207 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 CTRB1P17538 263 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 TBPP20226 339 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 HTR1FP30939 366 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 FAM74A1Q5RGS3 127 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 MARCH8Q5T0T0 291 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 CTRB2Q6GPI1 263 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 ZNF775Q96BV0 537 aaPredicted RBP13.78□□□□□ -0.2
LMX1B-201ENST00000355497 POFUT1Q9H488 388 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 PLK3Q9H4B4 646 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 RAB22AQ9UL26 194 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 TMED7Q9Y3B3 224 aa13.78□□□□□ -0.2
LMX1B-201ENST00000355497 I6L893 689 aaPredicted RBP13.77□□□□□ -0.2
LMX1B-201ENST00000355497 SPINT2O43291 252 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 DFFBO76075 338 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 ENPP1P22413 925 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 PRDX1Q06830 199 aaKnown RBP13.77□□□□□ -0.2
LMX1B-201ENST00000355497 SNTB1Q13884 538 aaKnown RBP13.77□□□□□ -0.2
LMX1B-201ENST00000355497 SPRED3Q2MJR0 410 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 DPY19L2P2Q6ZN68 376 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 DVL3Q92997 716 aaPredicted RBP13.77□□□□□ -0.2
LMX1B-201ENST00000355497 SHISA4Q96DD7 197 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 NMNAT3Q96T66 252 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 MAKP20794 623 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 FCN2Q15485 313 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 DBX2Q6ZNG2 339 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 NKAIN3Q8N8D7 197 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 SLC38A5Q8WUX1 472 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 MARC2Q969Z3 335 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 CLSTN3Q9BQT9 956 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 RNF32Q9H0A6 362 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 NTN4Q9HB63 628 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 ANKRD26Q9UPS8 1709 aa13.77□□□□□ -0.2
LMX1B-201ENST00000355497 ZDHHC11BP0C7U3 371 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 WNT7BP56706 349 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 FAM122BQ7Z309 247 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 ELF4Q99607 663 aaPredicted RBP13.77□□□□□ -0.21
LMX1B-201ENST00000355497 HEYLQ9NQ87 328 aaPredicted RBP13.77□□□□□ -0.21
LMX1B-201ENST00000355497 SLC22A11Q9NSA0 550 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 SLAMF8Q9P0V8 285 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 DOK2O60496 412 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 UTS2O95399 124 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 CD38P28907 300 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF93P35789 620 aaPredicted RBP13.77□□□□□ -0.21
LMX1B-201ENST00000355497 RAC1P63000 192 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 GABREP78334 506 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 FLI1Q01543 452 aaPredicted RBP13.77□□□□□ -0.21
LMX1B-201ENST00000355497 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.77□□□□□ -0.21
LMX1B-201ENST00000355497 C1orf87Q8N0U7 546 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 GAB3Q8WWW8 586 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 PKMYT1Q99640 499 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 CALHM2Q9HA72 323 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 MUTYHQ9UIF7 546 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 HEMK1Q9Y5R4 338 aaPredicted RBP13.77□□□□□ -0.21
LMX1B-201ENST00000355497 A0A087WZY1 265 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 OR5K3A6NET4 321 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF732B4DXR9 585 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 MT-ND4LP03901 98 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 THBS1P07996 1170 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 GABRA4P48169 554 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 PXNP49023 591 aaPredicted RBP13.77□□□□□ -0.21
LMX1B-201ENST00000355497 FOXK2Q01167 660 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 HSD17B11Q8NBQ5 300 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 FIZ1Q96SL8 496 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 ZCCHC4Q9H5U6 513 aa13.77□□□□□ -0.21
LMX1B-201ENST00000355497 OR6C76A6NM76 312 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 MTHFD2P13995 350 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 TMUB2Q71RG4 321 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 OR2T11Q8NH01 316 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 PIGQQ9BRB3 760 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 ARNT2Q9HBZ2 717 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 ZFP92A6NM28 416 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 ABHD16AO95870 558 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 HPNP05981 417 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 APEHP13798 732 aaKnown RBP13.76□□□□□ -0.21
LMX1B-201ENST00000355497 HTRA4P83105 476 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-201ENST00000355497 SYT13Q7L8C5 426 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 ADIPOR2Q86V24 386 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 OR52I1Q8NGK6 324 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 SCARB1Q8WTV0 552 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF331Q9NQX6 463 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-201ENST00000355497 SMLR1H3BR10 107 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 CHEK1O14757 476 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 FABP1P07148 127 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 OR13C7P0DN81 318 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 CCR6P51684 374 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 CARD18P57730 90 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 DCAF12Q5T6F0 453 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 LINC00346Q8IVM7 164 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 NAXDQ8IW45 347 aa13.76□□□□□ -0.21
LMX1B-201ENST00000355497 KDF1Q8NAX2 398 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms