RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 OR6N1Q8NGY5 312 aa14.25□□□□□ -0.13
PTPRU-201ENST00000345512 DLL4Q9NR61 685 aa14.25□□□□□ -0.13
PTPRU-201ENST00000345512 C2orf42Q9NWW7 574 aa14.25□□□□□ -0.13
PTPRU-201ENST00000345512 SCML1Q9UN30 329 aa14.25□□□□□ -0.13
PTPRU-201ENST00000345512 SCN3AQ9NY46 2000 aa14.25□□□□□ -0.13
PTPRU-201ENST00000345512 CALCBP10092 127 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 CRABP1P29762 137 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 EMDP50402 254 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 ELOCQ15369 112 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 ARTNQ5T4W7 220 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 KIRREL2Q6UWL6 708 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF704Q6ZNC4 412 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 ST8SIA4Q92187 359 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 MRPS18AQ9NVS2 196 aaKnown RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 GREB1Q4ZG55 1949 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 MEIKINA0A087WXM9 373 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 TMEM269A0A1B0GVZ9 245 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 CSTBP04080 98 aaKnown RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 ERCC1P07992 297 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 UBBP0CG47 229 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 UBCP0CG48 685 aaKnown RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 M6PRP20645 277 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 HTR2CP28335 458 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 SLC6A8P48029 635 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 ARRB1P49407 418 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 CLRN1P58418 232 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 RPS27AP62979 156 aaKnown RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 UBA52P62987 128 aaKnown RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 CLLU1Q5K131 121 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 OTPQ5XKR4 325 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 PXKQ7Z7A4 578 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 URM1Q9BTM9 101 aaKnown RBP14.24□□□□□ -0.13
PTPRU-201ENST00000345512 ADGRL4Q9HBW9 690 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 SERTAD3Q9UJW9 196 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 PIAS3Q9Y6X2 628 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 PRAMEF27A3QJZ7 478 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 WRBO00258 174 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 MAOAP21397 527 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 GLYATL3Q5SZD4 288 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 STAC2Q6ZMT1 411 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 SFTPA1Q8IWL2 248 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 PAQR8Q8TEZ7 354 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 SERGEFQ9UGK8 458 aa14.24□□□□□ -0.13
PTPRU-201ENST00000345512 LEUTXA8MZ59 168 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 BRINP1O60477 761 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 PET100P0DJ07 73 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF28P17035 718 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 DUSP2Q05923 314 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 FAM209AQ5JX71 171 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 CLVS2Q5SYC1 327 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 LIX1LQ8IVB5 337 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 PM20D2Q8IYS1 436 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 OR2L13Q8N349 312 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ELP5Q8TE02 316 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ARL11Q969Q4 196 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ZDHHC12Q96GR4 267 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 METTL7AQ9H8H3 244 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 FBRSQ9HAH7 460 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 LOC285556D6RIA3 1793 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 A0A0D9SG52 128 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 IL32P24001 234 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 CBX5P45973 191 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF41P51814 821 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-201ENST00000345512 CAPZA1P52907 286 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF595Q8IYB9 648 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ZBTB44Q8NCP5 570 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 OR11H7Q8NGC8 314 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 PTP4A1Q93096 173 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 POMT2Q9UKY4 750 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ADPRHP54922 357 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 MEF2DQ14814 521 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 CHRFAM7AQ494W8 412 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 NKAPLQ5M9Q1 402 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 OR4N2Q8NGD1 307 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 SIRT4Q9Y6E7 314 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-201ENST00000345512 SPTBP11277 2137 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 H3BML4 177 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 LGALS8O00214 317 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 P2RX1P51575 399 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 LUMP51884 338 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-201ENST00000345512 PXT1Q8NFP0 134 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF764Q96H86 408 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-201ENST00000345512 COX14Q96I36 57 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 NECAB3Q96P71 396 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-201ENST00000345512 TAS2R5Q9NYW4 299 aa14.23□□□□□ -0.13
PTPRU-201ENST00000345512 AGPAT2O15120 278 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF250P15622 560 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 TLE3Q04726 772 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 SMAD2Q15796 467 aaKnown RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 RCBTB1Q8NDN9 531 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 RNF170Q96K19 258 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 RBM7Q9Y580 266 aaKnown RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 A0A087WV62 115 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 P2RX6O15547 441 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 FADS1O60427 444 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 LILRB5O75023 590 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 TP53P04637 393 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 TMEM244Q5VVB8 128 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 ZSCAN1Q8NBB4 408 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 ASB17Q8WXJ9 295 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms