RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 BLACEA4D250 179 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 HMGN4O00479 90 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 EFNA3P52797 238 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 MRPS34P82930 218 aaKnown RBP16.69■□□□□ 0.26
SMC4-201ENST00000344722 MRPL49Q13405 166 aaKnown RBP16.69■□□□□ 0.26
SMC4-201ENST00000344722 SGCZQ96LD1 299 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 MARVELD1Q9BSK0 173 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 TMEM231Q9H6L2 316 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 UBQLN4Q9NRR5 601 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 A0A1B0GWA3 101 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 SLC5A10A0PJK1 596 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 PTAFRP25105 342 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 FGF9P31371 208 aaPredicted RBP16.69■□□□□ 0.26
SMC4-201ENST00000344722 PARS2Q7L3T8 475 aaKnown RBP16.69■□□□□ 0.26
SMC4-201ENST00000344722 DPY19L4Q7Z388 723 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 TMEM151BQ8IW70 566 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 HSD17B11Q8NBQ5 300 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 KLHDC7BQ96G42 594 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 FN3KRPQ9HA64 309 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 CMC2Q9NRP2 79 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 PCDHGA5Q9Y5G8 931 aa16.69■□□□□ 0.26
SMC4-201ENST00000344722 F5H5K5 113 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 SELENOFO60613 162 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 PRPH2P23942 346 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 SOX18P35713 384 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 GLDNQ6ZMI3 551 aaPredicted RBP16.68■□□□□ 0.26
SMC4-201ENST00000344722 NKAIN4Q8IVV8 208 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 SYS1Q8N2H4 156 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 GPR137CQ8N3F9 429 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 UPRTQ96BW1 309 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 SLC17A9Q9BYT1 436 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 CDCP1Q9H5V8 836 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 ALKBH4Q9NXW9 302 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 MRPS28Q9Y2Q9 187 aaKnown RBP16.68■□□□□ 0.26
SMC4-201ENST00000344722 C17orf105B2RV13 164 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 CRYBB2P43320 205 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 KIAA0907Q7Z7F0 614 aaPredicted RBP16.68■□□□□ 0.26
SMC4-201ENST00000344722 FAM71CQ8NEG0 241 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 FOXN4Q96NZ1 517 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 PRR14Q9BWN1 585 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 CYTIPO60759 359 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 ADAMTS4O75173 837 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 ACRP10323 421 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 ACHEP22303 614 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 FASLGP48023 281 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 SLC6A12P48065 614 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 ARRB1P49407 418 aaPredicted RBP16.68■□□□□ 0.26
SMC4-201ENST00000344722 IL17RCQ8NAC3 791 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 GPR174Q9BXC1 333 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 PRAMEF27A3QJZ7 478 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 OR52A4PA6NMU1 304 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 KDM4EB2RXH2 506 aaPredicted RBP16.68■□□□□ 0.26
SMC4-201ENST00000344722 DSCR3O14972 297 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 ZNF239Q16600 458 aaKnown RBP16.68■□□□□ 0.26
SMC4-201ENST00000344722 PRAMEF9Q5VWM5 478 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 RHOUQ7L0Q8 258 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 OR14L1PQ8NHC6 308 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 SLC6A17Q9H1V8 727 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 AUNIPQ9H7T9 357 aa16.68■□□□□ 0.26
SMC4-201ENST00000344722 A0A1W2PPV4 95 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 IFITM5A6NNB3 132 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 IL33O95760 270 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 TXNDC12O95881 172 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 MT-ND4LP03901 98 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 NPPBP16860 134 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 HLA-FP30511 346 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 TMEM64Q6YI46 380 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 SLC35D2Q76EJ3 337 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 TCEAL8Q8IYN2 117 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 DEFB126Q9BYW3 111 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 STRAPQ9Y3F4 350 aaKnown RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 PLEKHM1Q9Y4G2 1056 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 ZNF587BE7ETH6 402 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 NUDT21O43809 227 aaKnown RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 LCATP04180 440 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 OR4E1P0C645 316 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 FAM74A1Q5RGS3 127 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 TCTN3Q6NUS6 607 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 ZNF765Q7L2R6 523 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 TSTD1Q8NFU3 115 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 OR9K2Q8NGE7 335 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 RSPRY1Q96DX4 576 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 VSX1Q9NZR4 365 aaPredicted RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 HNRNPA1P09651 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMC4-201ENST00000344722 RPS18P62269 152 aaKnown RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 OR7A5Q15622 319 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 LTB4RQ15722 352 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 DUSP18Q8NEJ0 188 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 TSACCQ96A04 125 aaPredicted RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 METTL9Q9H1A3 318 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 PATZ1Q9HBE1 687 aaKnown RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 EXO1Q9UQ84 846 aaKnown RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 URGCP-MRPS24S4R325 110 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 C1QAP02745 245 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 CPN1P15169 458 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 OR2B8PP59922 312 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 PMPCAQ10713 525 aa16.67■□□□□ 0.26
SMC4-201ENST00000344722 YOD1Q5VVQ6 348 aaPredicted RBP16.67■□□□□ 0.26
SMC4-201ENST00000344722 C12orf73Q69YU5 71 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms