RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 LRP3O75074 770 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 RPL29P47914 159 aaKnown RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 RPP30P78346 268 aaKnown RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 LRRTM1Q86UE6 522 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 KDF1Q8NAX2 398 aaPredicted RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 FAM71CQ8NEG0 241 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 A0A0B4J203 849 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 TSPAN6O43657 245 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 STT3BQ8TCJ2 826 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 KIRREL1Q96J84 757 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 C11orf49Q9H6J7 331 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 CACNA1HO95180 2353 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 TMEM150CB9EJG8 249 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 G3V3Q6 166 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 CWH43Q9H720 699 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 SLC39A9Q9NUM3 307 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 ASGR2P07307 311 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 SLC2A1P11166 492 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 MMP15P51511 669 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 MPPED2Q15777 294 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 MPEG1Q2M385 716 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 TMEM179BQ7Z7N9 219 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 ZNF485Q8NCK3 441 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 ASB17Q8WXJ9 295 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 NOL4LQ96MY1 436 aaPredicted RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 FLVCR2Q9UPI3 526 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 DENND4AQ7Z401 1863 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 CA12O43570 354 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 CRYBA1P05813 215 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 SLC35A3Q9Y2D2 325 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 NCOR1O75376 2440 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 ST8SIA5O15466 376 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 SIM1P81133 766 aaPredicted RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 ID2Q02363 134 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 NECAP1Q8NC96 275 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 CYSLTR2Q9NS75 346 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 GPR31O00270 319 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 PDE7AQ13946 482 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 PET117Q6UWS5 81 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 C2orf15Q8WU43 125 aaKnown RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 A0A0D9SEW6 157 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 CD300LBA8K4G0 201 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 PAPLNO95428 1278 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 RNH1P13489 461 aaKnown RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 CD52P31358 61 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 ECI1P42126 302 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 CTSOP43234 321 aaPredicted RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 NUDCD2Q8WVJ2 157 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 PDE7BQ9NP56 450 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 WNT10BO00744 389 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 FRS3O43559 492 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 ZNF354AO60765 605 aaPredicted RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 MANEAQ5SRI9 462 aa12.65□□□□□ -0.38
TRIO-202ENST00000344204 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 ESRP2Q9H6T0 727 aaKnown RBP12.65□□□□□ -0.38
TRIO-202ENST00000344204 TRAV27A0A087WT01 109 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 MTMR11A4FU01 709 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 NFATC1O95644 943 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 GATMP50440 423 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 CLCNKAP51800 687 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 LIMK1P53667 647 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 OR10A3P58181 314 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 ELFN2Q5R3F8 820 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 SLC22A18Q96BI1 424 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 PTGES2Q9H7Z7 377 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.39
TRIO-202ENST00000344204 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 CXCL11O14625 94 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 CNMDO75829 334 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 PMS2P11Q13670 270 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 ACOT6Q3I5F7 207 aaPredicted RBP12.64□□□□□ -0.39
TRIO-202ENST00000344204 TRAM1L1Q8N609 369 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 CLSTN3Q9BQT9 956 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 FAM171A2A8MVW0 826 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 CCSO14618 274 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 PLSCR1O15162 318 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 SLC6A1P30531 599 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 PITX1P78337 314 aaPredicted RBP12.64□□□□□ -0.39
TRIO-202ENST00000344204 FAM3DQ96BQ1 224 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 USP36Q9P275 1121 aaKnown RBP12.64□□□□□ -0.39
TRIO-202ENST00000344204 ARRDC5A6NEK1 342 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 NPY4RP50391 375 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 SQSTM1Q13501 440 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 TRIM61Q5EBN2 209 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 TMEM123Q8N131 208 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 PLA2G15Q8NCC3 412 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 SLC38A5Q8WUX1 472 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 RHNO1Q9BSD3 238 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 BCKDHBP21953 392 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 OR2A2Q6IF42 318 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 SLC2A12Q8TD20 617 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 TMEM239Q8WW34 195 aa12.64□□□□□ -0.39
TRIO-202ENST00000344204 ZNF689Q96CS4 500 aaPredicted RBP12.64□□□□□ -0.39
TRIO-202ENST00000344204 SLC35B3Q9H1N7 401 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms