RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 STUB1Q9UNE7 303 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 ZNF337Q9Y3M9 751 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 ALPK2Q86TB3 2170 aa13.22□□□□□ -0.29
CXCL12-201ENST00000343575 IGF2RP11717 2491 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 CTDSP2O14595 271 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 OPN1LWP04000 364 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 HK1P19367 917 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 SRD5A2P31213 254 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 RFC3P40938 356 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 RFX2P48378 723 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 SLC9A3P48764 834 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 TSTQ16762 297 aaKnown RBP13.21□□□□□ -0.29
CXCL12-201ENST00000343575 FAM209AQ5JX71 171 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 FAM69AQ5T7M9 428 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 NXNL2Q5VZ03 156 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 SIGIRRQ6IA17 410 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 SLC27A4Q6P1M0 643 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 LRRC75AQ8NAA5 344 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 MOSPD2Q8NHP6 518 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 TEX47Q8TBZ9 253 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 FAM122AQ96E09 287 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 SMAD5Q99717 465 aaKnown RBP13.21□□□□□ -0.29
CXCL12-201ENST00000343575 SRRQ9GZT4 340 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 NANSQ9NR45 359 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 ACOXLQ9NUZ1 547 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 PAQR5Q9NXK6 330 aaPredicted RBP13.21□□□□□ -0.29
CXCL12-201ENST00000343575 CACNA1GO43497 2377 aa13.21□□□□□ -0.29
CXCL12-201ENST00000343575 TNRC6AQ8NDV7 1962 aaKnown RBP13.21□□□□□ -0.29
CXCL12-201ENST00000343575 CACNA1AO00555 2505 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 OR2M5A3KFT3 312 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 MCIDASD6RGH6 385 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 H3BML4 177 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 PRKYO43930 277 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 HCN1O60741 890 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 RCBTB2O95199 551 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 HSMCR30P0CW71 290 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 PEPDP12955 493 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 PSMA1P25786 263 aaKnown RBP13.21□□□□□ -0.3
CXCL12-201ENST00000343575 UQCRC1P31930 480 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 EIF1P41567 113 aaKnown RBP13.21□□□□□ -0.3
CXCL12-201ENST00000343575 MAP2K6P52564 334 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 ARG2P78540 354 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 SYT14P1Q58G82 188 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF767PQ75MW2 155 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 ATP6V1C2Q8NEY4 427 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 SUN5Q8TC36 379 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 ZFAND1Q8TCF1 268 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 IL4I1Q96RQ9 567 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 ASPNQ9BXN1 380 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 TMEM185BQ9H7F4 350 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 FKRPQ9H9S5 495 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 TVP23BQ9NYZ1 205 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 HIF3AQ9Y2N7 669 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 CMAHPQ9Y471 501 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 V9GYH0 126 aa13.21□□□□□ -0.3
CXCL12-201ENST00000343575 PTPRQQ9UMZ3 2332 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 FZD7O75084 574 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 GLSO94925 669 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-201ENST00000343575 CRYZL1O95825 349 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 CELA3AP09093 270 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 AQP2P41181 271 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 SMSP52788 366 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 P2RX3P56373 397 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 GALK2Q01415 458 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 PGGHGQ32M88 737 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 CCDC58Q4VC31 144 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 SLC6A19Q695T7 634 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 BCDIN3DQ7Z5W3 292 aaKnown RBP13.2□□□□□ -0.3
CXCL12-201ENST00000343575 YRDCQ86U90 279 aaKnown RBP13.2□□□□□ -0.3
CXCL12-201ENST00000343575 LNX2Q8N448 690 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 KCNS3Q9BQ31 491 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 TTTY12Q9BZ98 90 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF703Q9H7S9 590 aaPredicted RBP13.2□□□□□ -0.3
CXCL12-201ENST00000343575 TAS2R5Q9NYW4 299 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 DKKL1Q9UK85 242 aa13.2□□□□□ -0.3
CXCL12-201ENST00000343575 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF670-ZNF695F2Z2N8 137 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 SLC2A10O95528 541 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 PDGFAP04085 211 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RAB25P57735 213 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 SNRPGP62308 76 aaKnown RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 MED22Q15528 200 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF766Q5HY98 468 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RPL13AP3Q6NVV1 102 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 C3orf33Q6P1S2 294 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 C5orf46Q6UWT4 87 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 C10orf53Q8N6V4 93 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 TCEANCQ8N8B7 351 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 ZFP62Q8NB50 900 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 OR2T33Q8NG76 320 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 OR6S1Q8NH40 331 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 SLC25A36Q96CQ1 311 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 POLDIP3Q9BY77 421 aaKnown RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 POTEKPQ9BYX7 375 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RNF167Q9H6Y7 350 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 BOKQ9UMX3 212 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms