RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 Q6ZT83 130 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 TUBA1AQ71U36 451 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 DMRTC2Q8IXT2 367 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 RNF113BQ8IZP6 322 aaKnown RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 OR52N5Q8NH56 324 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 LRTOMTQ8WZ04 291 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 POLDIP3Q9BY77 421 aaKnown RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 EGLN3Q9H6Z9 239 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 KRCC1Q9NPI7 259 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 CCM2LQ9NUG4 571 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 PDP1Q9P0J1 537 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 TMEM5Q9Y2B1 443 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 SH3D21A4FU49 640 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 KRT36O76013 467 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 ITGA5P08648 1049 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 LIMS1P48059 325 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 ROR2Q01974 943 aaKnown RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 FHL1Q13642 323 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 FBXL19-AS1Q494R0 122 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 ZBED5Q49AG3 693 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 HIKESHIQ53FT3 197 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 FBXW10Q5XX13 1052 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 KIF18BQ86Y91 864 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 GPR137CQ8N3F9 429 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 OR10G2Q8NGC3 310 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 RASD2Q96D21 266 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 TSPAN32Q96QS1 320 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 KATNB1Q9BVA0 655 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 DENND2DQ9H6A0 471 aaPredicted RBP11.64□□□□□ -0.55
TUBD1-202ENST00000340993 CRLF2Q9HC73 371 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 HIF3AQ9Y2N7 669 aa11.64□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF587BE7ETH6 402 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 IMPA2O14732 288 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 ENTPD5O75356 428 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF432O94892 652 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 PPP1R3DO95685 299 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 PRF1P14222 555 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 ACVR1BP36896 505 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 CSNK1A1P48729 337 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 CLRN1P58418 232 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 FMODQ06828 376 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 CD47Q08722 323 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 ITGADQ13349 1161 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 SFRP5Q5T4F7 317 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 HMBOX1Q6NT76 420 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 SAMD8Q96LT4 415 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 FOXN4Q96NZ1 517 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 RAB3IPQ96QF0 476 aaPredicted RBP11.63□□□□□ -0.55
TUBD1-202ENST00000340993 NIPSNAP1Q9BPW8 284 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 RERGLQ9H628 205 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 ELOVL5Q9NYP7 299 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF346Q9UL40 294 aaKnown RBP11.63□□□□□ -0.55
TUBD1-202ENST00000340993 AP4S1Q9Y587 144 aa11.63□□□□□ -0.55
TUBD1-202ENST00000340993 AKAP8O43823 692 aaKnown RBP11.62□□□□□ -0.55
TUBD1-202ENST00000340993 FZD7O75084 574 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 SLC2A10O95528 541 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 IGFBP2P18065 325 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 FXYD6P3P58550 94 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 MICAQ29983 383 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 CEACAM16Q2WEN9 425 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 OTPQ5XKR4 325 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 SMARCD3Q6STE5 483 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 TMPRSS11FQ6ZWK6 438 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 TMEM123Q8N131 208 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF433Q8N7K0 673 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ICA1LQ8NDH6 482 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 GNPDA2Q8TDQ7 276 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 GIPC3Q8TF64 312 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ASB10Q8WXI3 467 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 NSMAFQ92636 917 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF566Q969W8 418 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 Q96M85 177 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ULBP2Q9BZM5 246 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 MALT1Q9UDY8 824 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-202ENST00000340993 SIGLEC7Q9Y286 467 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 IER3IP1Q9Y5U9 82 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 APCP25054 2843 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 TEX13CA0A0J9YWL9 993 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 SAC3D1A6NKF1 404 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 SOCS2O14508 198 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ARHGEF9O43307 516 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 TRMUO75648 421 aaKnown RBP11.62□□□□□ -0.55
TUBD1-202ENST00000340993 IFNGR2P38484 337 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 CAPZA2P47755 286 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ACTR3P61158 418 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 RPS4XP62701 263 aaKnown RBP11.62□□□□□ -0.55
TUBD1-202ENST00000340993 ZP4Q12836 540 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 SLC35F1Q5T1Q4 408 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 TMEM200AQ86VY9 491 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 LRRC75AQ8NAA5 344 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 HDAC2Q92769 488 aaKnown RBP11.62□□□□□ -0.55
TUBD1-202ENST00000340993 FEVQ99581 238 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 IFT27Q9BW83 186 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 PLA2G12AQ9BZM1 189 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 OR52D1Q9H346 318 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 GPR35Q9HC97 309 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 TAS2R16Q9NYV7 291 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms