RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 HMBOX1Q6NT76 420 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 C16orf89Q6UX73 402 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 KBTBD8Q8NFY9 601 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 AKAP1Q92667 903 aaKnown RBP eCLIP13.46□□□□□ -0.25
VAPA-201ENST00000340541 NEUROG1Q92886 237 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 SGTBQ96EQ0 304 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 NSL1Q96IY1 281 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 C7orf34Q96L11 122 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 LRR1Q96L50 414 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 Q96MF0 132 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 NDE1Q9NXR1 346 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 AMDHD2Q9Y303 409 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 ENPP4Q9Y6X5 453 aa13.46□□□□□ -0.25
VAPA-201ENST00000340541 B2RBV5 119 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 SHISA9B4DS77 424 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 H7C1Q1 480 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 ARPC2O15144 300 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 OR6A2O95222 327 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 SEMG1P04279 462 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 UMPSP11172 480 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 MNAT1P51948 309 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 SH3BGRP55822 239 aaPredicted RBP13.45□□□□□ -0.26
VAPA-201ENST00000340541 BIDP55957 195 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 ARF1P84077 181 aaKnown RBP13.45□□□□□ -0.26
VAPA-201ENST00000340541 RPL18Q07020 188 aaKnown RBP13.45□□□□□ -0.26
VAPA-201ENST00000340541 TRAM2Q15035 370 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 CEACAM16Q2WEN9 425 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 SPATS1Q496A3 300 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 SLC35D2Q76EJ3 337 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 NANOGNBQ7Z5D8 188 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 GPR137CQ8N3F9 429 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 ZNF611Q8N823 705 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 OR6X1Q8NH79 312 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 MAGEE2Q8TD90 523 aaPredicted RBP13.45□□□□□ -0.26
VAPA-201ENST00000340541 FNDC11Q9BVV2 318 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 C1QTNF6Q9BXI9 259 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 CRLF2Q9HC73 371 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 NDUFAF4Q9P032 175 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 MAGEL2Q9UJ55 1249 aa13.45□□□□□ -0.26
VAPA-201ENST00000340541 SAMD4AQ9UPU9 718 aaKnown RBP13.45□□□□□ -0.26
VAPA-201ENST00000340541 HEATR1Q9H583 2144 aaKnown RBP13.45□□□□□ -0.26
VAPA-201ENST00000340541 A0A087WUU8 490 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 ARPC4-TTLL3A0A0A6YYG9 625 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 HTR3EA5X5Y0 456 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 M0R3G1 203 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 ABCD4O14678 606 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 RNF13O43567 381 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 HIST1H2ABP04908 130 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 IFI30P13284 250 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 MAKP20794 623 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 CD40P25942 277 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 IFNA8P32881 189 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 AQP2P41181 271 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 PRPS1P60891 318 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 MXRA7P84157 204 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 VLDLRP98155 873 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 SPOCK1Q08629 439 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 CAMK2DQ13557 499 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 ZNF672Q499Z4 452 aaPredicted RBP13.44□□□□□ -0.26
VAPA-201ENST00000340541 ANKRD16Q6P6B7 361 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 TMEM108Q6UXF1 575 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 RINLQ6ZS11 566 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 HIST3H2AQ7L7L0 130 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 NRMQ8IXM6 262 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 CIARTQ8N365 385 aaPredicted RBP13.44□□□□□ -0.26
VAPA-201ENST00000340541 MOSPD2Q8NHP6 518 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 ACOT11Q8WXI4 607 aaPredicted RBP13.44□□□□□ -0.26
VAPA-201ENST00000340541 HIST1H2ACQ93077 130 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 BPIFA2Q96DR5 249 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 ADAD1Q96M93 576 aaKnown RBP13.44□□□□□ -0.26
VAPA-201ENST00000340541 NMNAT1Q9HAN9 279 aaPredicted RBP13.44□□□□□ -0.26
VAPA-201ENST00000340541 OBP2BQ9NPH6 170 aa13.44□□□□□ -0.26
VAPA-201ENST00000340541 ZNF701Q9NV72 531 aaPredicted RBP13.44□□□□□ -0.26
VAPA-201ENST00000340541 USF3Q68DE3 2245 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 A0A096LPE4 126 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 A0A1W2PPZ6 126 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 ZNF503-AS2A6NEH8 195 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 ZNF726A6NNF4 738 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 BLOC1S5-TXNDC5H3BN57 136 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 M0R1B8 84 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 F13BP05160 661 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 DANCRP0C864 163 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 PTAFRP25105 342 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 PTH2RP49190 550 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 RPS4XP62701 263 aaKnown RBP13.43□□□□□ -0.26
VAPA-201ENST00000340541 PRKCDQ05655 676 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 FHL1Q13642 323 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 MELKQ14680 651 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 TBPL2Q6SJ96 375 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 KLHL17Q6TDP4 642 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 ZNF627Q7L945 461 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 MEX3DQ86XN8 651 aaKnown RBP13.43□□□□□ -0.26
VAPA-201ENST00000340541 TMEM171Q8WVE6 324 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 TMEM54Q969K7 222 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 PERPQ96FX8 193 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 PYURFQ96I23 114 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 SEPHS2Q99611 448 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 ANKRD19PQ9H560 264 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 CXorf56Q9H5V9 222 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 HIF3AQ9Y2N7 669 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms