RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 OR51L1Q8NGJ5 315 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 OR5H6Q8NGV6 325 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 TTC9Q92623 222 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 INTS14Q96SY0 518 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SLC26A1Q9H2B4 701 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 TP63Q9H3D4 680 aaPredicted RBP9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 DPAGT1Q9H3H5 408 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SLC22A11Q9NSA0 550 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PISDQ9UG56 409 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 NUFIP1Q9UHK0 495 aaKnown RBP9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 V9GY05 133 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SPAG17Q6Q759 2223 aa9.7□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PRSS37A4D1T9 235 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 VSTM2BA6NLU5 285 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ZNF208O43345 1280 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 LANCL1O43813 399 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SDC3O75056 442 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PAHP00439 452 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 CXCL12P48061 93 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ARRB1P49407 418 aaPredicted RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 CCR4P51679 360 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 AGFG1P52594 562 aaKnown RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 RNF4P78317 190 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 DMWDQ09019 674 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 KLF9Q13886 244 aaPredicted RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 TOMM20Q15388 145 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PCK2Q16822 640 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 VWA2Q5GFL6 755 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 BPHLQ86WA6 291 aaPredicted RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ADGRG3Q86Y34 549 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PLCZ1Q86YW0 608 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GHDCQ8N2G8 530 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ZNF454Q8N9F8 522 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 OR5AK2Q8NH90 309 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ZNF417Q8TAU3 575 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 AKAP1Q92667 903 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 HLA-CQ95604 372 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 MCHR2Q969V1 340 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 CCDC74AQ96AQ1 378 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PDCD1LG2Q9BQ51 273 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 HDHD2Q9H0R4 259 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SLITRK2Q9H156 845 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ING3Q9NXR8 418 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 TMED7-TICAM2A0A0A6YYA0 188 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 IGLV1-36A0A0B4J1U3 117 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GABARAPH6UMI1 98 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SLC25A12O75746 678 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 CSRP1P21291 193 aaKnown RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 S100A1P23297 94 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GZMKP49863 264 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ELFN2Q5R3F8 820 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 MARCH3Q86UD3 253 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 LRRTM1Q86UE6 522 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 C10orf53Q8N6V4 93 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 APCDD1LQ8NCL9 501 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 OR4D9Q8NGE8 314 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 HGDQ93099 445 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ADAD1Q96M93 576 aaKnown RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 DCBLD2Q96PD2 775 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 OR8B4Q96RC9 309 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GAL3ST4Q96RP7 486 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 YIPF2Q9BWQ6 316 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GON7Q9BXV9 100 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 TAS2R10Q9NYW0 307 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 FRRS1LQ9P0K9 344 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 LAMP5Q9UJQ1 280 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 MKL2Q9ULH7 1088 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 KLHDC2Q9Y2U9 406 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 TMED7Q9Y3B3 224 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 B3GALT1Q9Y5Z6 326 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 TMEM72A0PK05 275 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 DCTN6O00399 190 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PLPP3O14495 311 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GPR171O14626 319 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 YKT6O15498 198 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SCO2O43819 266 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 SUSD5O60279 629 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 DHFRP00374 187 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PRKCAP17252 672 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 MSX1P28360 303 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 EPHA8P29322 1005 aaPredicted RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 APOBEC1P41238 236 aaKnown RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 C17orf67Q0P5P2 114 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 NTRK2Q16620 822 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GXYLT1Q4G148 440 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 C1orf140Q5VVS0 124 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ZNF385CQ66K41 422 aaPredicted RBP9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 IL20RBQ6UXL0 311 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ZNF511Q8NB15 262 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 OR2G2Q8NGZ5 317 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 MFSD8Q8NHS3 518 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 ZFAND1Q8TCF1 268 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GPR148Q8TDV2 347 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 HAVCR1Q96D42 359 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 OR2M2Q96R28 347 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 GHITMQ9H3K2 345 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 PLSCR2Q9NRY7 297 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 B9D1Q9UPM9 204 aa9.69□□□□□ -0.86
TRAF3IP2-201ENST00000340026 DNAH14Q0VDD8 3507 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms