RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ZNF774Q6NX45 483 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 CDC73Q6P1J9 531 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 FAM199XQ6PEV8 388 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 ZNF705AQ6ZN79 300 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 MMP21Q8N119 569 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 PAQR4Q8N4S7 273 aaPredicted RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TMEM104Q8NE00 496 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 OR1L6Q8NGR2 347 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 DCUN1D4Q92564 292 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TM4SF18Q96CE8 201 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 RRNAD1Q96FB5 475 aaKnown RBP8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 GALNT14Q96FL9 552 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 WFIKKN1Q96NZ8 548 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 CAPN10Q9HC96 672 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 TMEM100Q9NV29 134 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 ASIC5Q9NY37 505 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 RNF181Q9P0P0 153 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 HDGFL3Q9Y3E1 203 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 LTBP3Q9NS15 1303 aa8.84□□□□□ -0.99
PTCHD4-201ENST00000339488 A0A1W2PPC1 479 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 NAP1L6A6NFF2 107 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 MSGN1A6NI15 193 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CPSF4LA6NMK7 179 aaKnown RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 MCIDASD6RGH6 385 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 FLRT2O43155 660 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 SCGNO76038 276 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 LRG1P02750 347 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 IRF2P14316 349 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 PRPS1L1P21108 318 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 MC4RP32245 332 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 THBS4P35443 961 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 HMGCS2P54868 508 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 MC1RQ01726 317 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 TUSC3Q13454 348 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 UBXN11Q5T124 520 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CPTPQ5TA50 214 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 FBXW9Q5XUX1 488 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 GAREM2Q75VX8 874 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 RFLNBQ8N5W9 214 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 BEND2Q8NDZ0 799 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 SYNPRQ8TBG9 265 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 NOL4LQ96MY1 436 aaPredicted RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 PTCHD1Q96NR3 888 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 OR14A2Q96R54 314 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 TIMP4Q99727 224 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 APMAPQ9HDC9 416 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 LOC285556D6RIA3 1793 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 UMAD1C9J7I0 102 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 MFNGO00587 321 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 TP53I11O14683 189 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 PRAMEF4O60810 478 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 SNAPC5O75971 98 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CD5P06127 495 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 TRGC1P0CF51 173 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 LBX1P52954 281 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 UBE2NLQ5JXB2 153 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 MARC1Q5VT66 337 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 PRAMEF9Q5VWM5 478 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 KCTD9Q7L273 389 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 OR8J2Q8NGG1 315 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 OR13C2Q8NGS9 318 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 Q8WTZ3 238 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 OIT3Q8WWZ8 545 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 FRZBQ92765 325 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 MALSU1Q96EH3 234 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 WRAP53Q9BUR4 548 aaKnown RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 BOCQ9BWV1 1114 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 SLC25A31Q9H0C2 315 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 OR52A5Q9H2C5 316 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 TXNRD2Q9NNW7 524 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CHST11Q9NPF2 352 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 UBQLN4Q9NRR5 601 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 FOXJ2Q9P0K8 574 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 GNG8Q9UK08 70 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 KCND3Q9UK17 655 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CHTOPQ9Y3Y2 248 aaKnown RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 TBC1D3BA6NDS4 549 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 ZNF724A8MTY0 619 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 M0QZ24 198 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CYB5BO43169 146 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 ADAP1O75689 374 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CBR3O75828 277 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 CD14P08571 375 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 ELFN1P0C7U0 828 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 TBC1D3HP0C7X1 549 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 ZNF888P0CJ79 500 aaPredicted RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 TNFSF10P50591 281 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 PNLIPRP1P54315 467 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 SLC37A1P57057 533 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 SOX8P57073 446 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 OR12D2P58182 307 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 FKBP1AP62942 108 aaKnown RBP8.83□□□□□ -1
PTCHD4-201ENST00000339488 GAGE1Q13065 139 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 ZNF345Q14585 488 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 GPNMBQ14956 572 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 HERPUD1Q15011 391 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 PRAMEF14Q5SWL7 426 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 ARMC12Q5T9G4 340 aa8.83□□□□□ -1
PTCHD4-201ENST00000339488 TBC1D3GQ6DHY5 549 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms