RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 GPR148Q8TDV2 347 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TCTEX1D2Q8WW35 142 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 RNF166Q96A37 237 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 MVB12AQ96EY5 273 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CAPN10Q9HC96 672 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 PRM3Q9NNZ6 103 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 A4GALTQ9NPC4 353 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 SMCO4Q9NRQ5 59 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 IL17CQ9P0M4 197 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 VPS29Q9UBQ0 182 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3DA0A087WVF3 549 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3IA0A087WXS9 549 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3EA0A087X179 549 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3KA0A087X1G2 549 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3FA6NER0 549 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 NUDT19A8MXV4 375 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3LB9A6J9 549 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 GLCEO94923 617 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 ITGA5P08648 1049 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 FURINP09958 794 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 NT5EP21589 574 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 MAT2AP31153 395 aaKnown RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CTHP32929 405 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 NSG1P42857 185 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 OMPP47874 163 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CDH11P55287 796 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 FXYD6P3P58550 94 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CLINT1Q14677 625 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3CQ6IPX1 549 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 C11orf87Q6NUJ2 197 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 DHRS11Q6UWP2 260 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 RPTNQ6XPR3 784 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 ABHD13Q7L211 337 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 LRRC70Q7Z2Q7 622 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 CEACAM19Q7Z692 300 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 PPP1R3BQ86XI6 285 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 TBC1D3Q8IZP1 549 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 LYPD6BQ8NI32 183 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 DNASE2BQ8WZ79 361 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 RBM18Q96H35 190 aaKnown RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 UNKLQ9H9P5 680 aaKnown RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 PTGFRNQ9P2B2 879 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 KLHL9Q9P2J3 617 aa5.09□□□□□ -1.59
CSDE1-202ENST00000339438 SNRNP200O75643 2136 aaKnown RBP5.09□□□□□ -1.59
CSDE1-202ENST00000339438 hCG_1809904A0A1W2PP81 198 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 A0A1W2PR64 198 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 A0A1W2PRV1 198 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 ZC3H12DA2A288 527 aaKnown RBP5.09□□□□□ -1.6
CSDE1-202ENST00000339438 BTBD17A6NE02 478 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 A8MWP6 167 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 INSIG1O15503 277 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 APBB3O95704 486 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 SFTA3P0C7M3 94 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 C1GALT1C1LP0DN25 315 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 HTR2AP28223 471 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 GJA4P35212 333 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 CASRP41180 1078 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 ANXA11P50995 505 aaKnown RBP5.09□□□□□ -1.6
CSDE1-202ENST00000339438 PNLIPRP1P54315 467 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 MC1RQ01726 317 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF85Q03923 595 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 PJVKQ0ZLH3 352 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 SURF2Q15527 256 aaPredicted RBP5.09□□□□□ -1.6
CSDE1-202ENST00000339438 TCEA2Q15560 299 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 AARDQ4LEZ3 155 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 ANXA8L1Q5VT79 327 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 SYT13Q7L8C5 426 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 OR6N1Q8NGY5 312 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 BRIX1Q8TDN6 353 aaKnown RBP5.09□□□□□ -1.6
CSDE1-202ENST00000339438 PIK3IP1Q96FE7 263 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 SMIM8Q96KF7 97 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 CNTNAP3BQ96NU0 1288 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 IP6K3Q96PC2 410 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 KXD1Q9BQD3 176 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 GINS4Q9BRT9 223 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 HCAR1Q9BXC0 346 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 GPN1Q9HCN4 374 aaPredicted RBP5.09□□□□□ -1.6
CSDE1-202ENST00000339438 HINT3Q9NQE9 182 aaKnown RBP5.09□□□□□ -1.6
CSDE1-202ENST00000339438 RUVBL1Q9Y265 456 aaKnown RBP5.09□□□□□ -1.6
CSDE1-202ENST00000339438 MMACHCQ9Y4U1 282 aa5.09□□□□□ -1.6
CSDE1-202ENST00000339438 A0A087WUU8 490 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF724A8MTY0 619 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 PRR23D1E9PI22 279 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-202ENST00000339438 PIN1P1O15428 100 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 KCNAB3O43448 404 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 OIP5O43482 229 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 NME6O75414 186 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-202ENST00000339438 THY1P04216 161 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 ITGB2P05107 769 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 SNRPCP09234 159 aaKnown RBP5.08□□□□□ -1.6
CSDE1-202ENST00000339438 PRR23D2P0DMB1 279 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-202ENST00000339438 ST6GAL1P15907 406 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 MPZP25189 248 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 AKR1C3P42330 323 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 CAV2P51636 162 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 TNFRSF9Q07011 255 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 POU4F2Q12837 409 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 ILF3Q12906 894 aaKnown RBP eCLIP5.08□□□□□ -1.6
CSDE1-202ENST00000339438 PLA2G7Q13093 441 aa5.08□□□□□ -1.6
CSDE1-202ENST00000339438 NAE1Q13564 534 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms