RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 LCN1P31025 176 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CASP3P42574 277 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 PCGF3Q3KNV8 242 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ABHD12BQ7Z5M8 362 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CPEB2Q7Z5Q1 589 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SMAP2Q8WU79 429 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 LHX9Q9NQ69 397 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CHST2Q9Y4C5 530 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 UBL3O95164 117 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 PAHP00439 452 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 IFNA7P01567 189 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 FASLGP48023 281 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 LTBQ06643 244 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 COL28A1Q2UY09 1125 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 DCAF12Q5T6F0 453 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 RPS19BP1Q86WX3 136 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 UBALD2Q8IYN6 164 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF224Q9NZL3 707 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 PRAMEF25A6NGN4 478 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SYNGR4O95473 234 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ARHGDIBP52566 201 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 PER3P56645 1201 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CLDN17P56750 224 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 BDH1Q02338 343 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ALKBH1Q13686 389 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 GLYR1Q49A26 553 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CDNFQ49AH0 187 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 C3orf49Q96BT1 292 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF775Q96BV0 537 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 BORCS8Q96FH0 119 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZPBPQ9BS86 351 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 IFNA21P01568 189 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 LCATP04180 440 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CAPZA1P52907 286 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 FXYD6P3P58550 94 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 FABP5Q01469 135 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 C8orf44Q96CB5 159 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 HAVCR1Q96D42 359 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 RANBP3Q9H6Z4 567 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 FKRPQ9H9S5 495 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 FKBP14Q9NWM8 211 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 RCE1Q9Y256 329 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 EPOPA6NHQ4 379 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 G3V3Y1 287 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 WDPCPO95876 746 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 RPS27P42677 84 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 RAB11BQ15907 218 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SWI5Q1ZZU3 235 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SIRT6Q8N6T7 355 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 MORN4Q8NDC4 146 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 IGKV1-8A0A0C4DH67 115 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 TEX13DA0A0J9YY54 714 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CDC42EP2O14613 210 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 GDF1P27539 372 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 GPR3P46089 330 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ARTNQ5T4W7 220 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 PSD2Q9BQI7 771 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 EMC6Q9BV81 110 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 AKAP6Q13023 2319 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 TEX46H3BTG2 121 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 DSCR3O14972 297 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CHRNB1P11230 501 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 EPHA4P54764 986 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 EEF1A1P68104 462 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 TATDN3Q17R31 274 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 AADACL4Q5VUY2 407 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 FAM180AQ6UWF9 173 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CADM3Q8N126 398 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 OR2T35Q8NGX2 323 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 IFI44Q8TCB0 444 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ISG20L2Q9H9L3 353 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CAMK2AQ9UQM7 478 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 F5H5K5 113 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 AMY2AP04746 511 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CD53P19397 219 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 POU3F4P49335 361 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 EVX1P49640 407 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 P2RY14Q15391 338 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SSX1Q16384 188 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZAR1Q86SH2 424 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF486Q96H40 463 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 MUTYHQ9UIF7 546 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 RRP8O43159 456 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 IGHG1P01857 330 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 HEXAP06865 529 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SOX18P35713 384 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 SNRPD2P62316 118 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 UBE2IP63279 158 aaKnown RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ATXN7L3Q14CW9 347 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF454Q8N9F8 522 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CLEC1AQ8NC01 280 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 OR8D4Q8NGM9 314 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 OR1L3Q8NH93 324 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 C10orf90Q96M02 699 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 GDF15Q99988 308 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CDCP1Q9H5V8 836 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 MGAT4AQ9UM21 535 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 FRG2CA6NGY1 282 aa5.75□□□□□ -1.49
PRKDC-202ENST00000338368 CYR61O00622 381 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms