RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GALNT8Q9NY28 637 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 NDRG3Q9UGV2 375 aa10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 PHF3Q92576 2039 aaKnown RBP10.53□□□□□ -0.72
SPTLC1-202ENST00000337841 CIB4A0PJX0 185 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 A1L4Q6 167 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 CENPBD1B2RD01 187 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF587BE7ETH6 402 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 H3BNX3 289 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 IDH3BO43837 385 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 IGHG1P01857 330 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 NR2C1P13056 603 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ACADSP16219 412 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF23P17027 643 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ACVR1BP36896 505 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 CSNK1A1P48729 337 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 RPS6KA3P51812 740 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 CLRN1P58418 232 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ERVK-25P63136 954 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 TGFBR3Q03167 851 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 TFF3Q07654 80 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ITGADQ13349 1161 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 SFRP5Q5T4F7 317 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 HMBOX1Q6NT76 420 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 IGFN1Q86VF2 1251 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 C20orf196Q8IYI0 205 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 TMEM123Q8N131 208 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 GABRG1Q8N1C3 465 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 CLDN22Q8N7P3 220 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ARIH2OSQ8N7S6 290 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 STEAP2Q8NFT2 490 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 OR52L1Q8NGH7 329 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 FANK1Q8TC84 345 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 FNDC8Q8TC99 324 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 DNAJC9Q8WXX5 260 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 SAMD8Q96LT4 415 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 RBP7Q96R05 134 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 PKP2Q99959 881 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 KATNB1Q9BVA0 655 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 OSBPL10Q9BXB5 764 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 ENKD1Q9H0I2 346 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 SEMA6AQ9H2E6 1030 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 OR52D1Q9H346 318 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 KIF17Q9P2E2 1029 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 IER3IP1Q9Y5U9 82 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 CDH10Q9Y6N8 788 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 HIVEP3Q5T1R4 2406 aa10.52□□□□□ -0.73
SPTLC1-202ENST00000337841 UBR5O95071 2799 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 M0R3G1 203 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 XKRYO14609 159 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 IMPA2O14732 288 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 AHCYL1O43865 530 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 UPK3AO75631 287 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 CLDN1O95832 211 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 IGHMP01871 453 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 APEHP13798 732 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 PPP3CBP16298 524 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 PSMB1P20618 241 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 IL32P24001 234 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 EDNRAP25101 427 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 MPGP29372 298 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 UGT2B10P36537 528 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 SORDQ00796 357 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 TOP3AQ13472 1001 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 MELKQ14680 651 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 ARMC4Q5T2S8 1044 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 OR7E24Q6IFN5 339 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 STAC2Q6ZMT1 411 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 CXorf67Q86X51 503 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 HS3ST5Q8IZT8 346 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 ICA1LQ8NDH6 482 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 ASB10Q8WXI3 467 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 KISS1RQ969F8 398 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 TMEM54Q969K7 222 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 ERMAPQ96PL5 475 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 IFT27Q9BW83 186 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 OR10A4Q9H209 315 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 NRIP3Q9NQ35 241 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 TAS2R16Q9NYV7 291 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 IL20Q9NYY1 176 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 GLTPQ9NZD2 209 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 MALT1Q9UDY8 824 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 POFUT2Q9Y2G5 429 aa10.51□□□□□ -0.73
SPTLC1-202ENST00000337841 DIDO1Q9BTC0 2240 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 KIAA1549Q9HCM3 1950 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 TUBAL3A6NHL2 446 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 SAC3D1A6NKF1 404 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 H0YHG0 523 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 H3BN98 237 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 RPL36A-HNRNPH2H7BZ11 118 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 CASKO14936 926 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ARPC3O15145 178 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ARHGEF9O43307 516 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 TRMUO75648 421 aaKnown RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 OSMP13725 252 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 ZNF26P17031 533 aaPredicted RBP10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 IGHV1-2P23083 117 aa10.5□□□□□ -0.73
SPTLC1-202ENST00000337841 NOS3P29474 1203 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms