RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 A6NLC8 198 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF814B7Z6K7 855 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF587BE7ETH6 402 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SP9P0CG40 484 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CCL4P13236 92 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 IL32P24001 234 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ADH7P40394 386 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GNG2P59768 71 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GPR176Q14439 515 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 TMEM236Q5W0B7 351 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 RTL6Q6ICC9 239 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 RASL10BQ96S79 203 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 B3GNT4Q9C0J1 378 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ENAMQ9NRM1 1142 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 NTMQ9P121 344 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 EXTL2Q9UBQ6 330 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 DOCK5Q9H7D0 1870 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 TMEM72A0PK05 275 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 PATE3B3GLJ2 98 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 TO15178 435 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GALR2O43603 387 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 HPP00738 406 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 UBBP0CG47 229 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 UBCP0CG48 685 aaKnown RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CCNOP22674 350 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GCH1P30793 250 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ETV6P41212 452 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 RPS23P62266 143 aaKnown RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ZMAT1Q5H9K5 638 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SSX8Q7RTT4 187 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 C17orf82Q86X59 251 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 RBM45Q8IUH3 476 aaKnown RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SLC35F2Q8IXU6 374 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SLC22A18ASQ8N1D0 253 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 OR52H1Q8NGJ2 320 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 USB1Q9BQ65 265 aaKnown RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 IFT46Q9NQC8 304 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 POU2F3Q9UKI9 436 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 MYO7BQ6PIF6 2116 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 TRDV1A0A1B0GX56 115 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ANKUB1A6NFN9 424 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 DVL2O14641 736 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 MSR1P21757 451 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 PRSS3P35030 304 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 DDOSTP39656 456 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ART1P52961 327 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 DSCR4P56555 118 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 IGLV3-21P80748 117 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SMCO1Q147U7 214 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GLYR1Q49A26 553 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SPATC1Q76KD6 591 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 PRSS41Q7RTY9 318 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 MRGPREQ86SM8 312 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 DEFB124Q8NES8 71 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CSNK2A3Q8NEV1 391 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 C7orf50Q9BRJ6 194 aaKnown RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SPATA2Q9UM82 520 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 NAP1L6A6NFF2 107 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ARGFXA6NJG6 315 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ABHD16AO95870 558 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 HRGP04196 525 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SMIM10L1P0DMW3 83 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 PITPNBP48739 271 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SLC37A1P57057 533 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GABREP78334 506 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SRSF5Q13243 272 aaKnown RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SMN1Q16637 294 aaKnown RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SLC16A9Q7RTY1 509 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GALNTL5Q7Z4T8 443 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CCDC36Q8IYA8 594 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF511Q8NB15 262 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 OR2I1PQ8NGU4 316 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 FGF11Q92914 225 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 FAM46BQ96A09 425 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SMIM10Q96HG1 83 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CCDC32Q9BV29 185 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 TGIF2Q9GZN2 237 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SIGLEC7Q9Y286 467 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ZNF281Q9Y2X9 895 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CXCL13O43927 109 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CHRM2P08172 466 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 HOXB3P14651 431 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 PTNP21246 168 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GABRA5P31644 462 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 RAC3P60763 192 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ZXDCQ2QGD7 858 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-201ENST00000335508 BCL2L15Q5TBC7 163 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 HBMQ6B0K9 141 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 C22orf42Q6IC83 251 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 AMER3Q8N944 861 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 GPR32P1Q8NGA4 272 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 OR6M1Q8NGM8 313 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SETD6Q8TBK2 473 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 TMEM255BQ8WV15 326 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ARSGQ96EG1 525 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 OXGR1Q96P68 337 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 CACNG6Q9BXT2 260 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ELOVL3Q9HB03 270 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 SLC6A13Q9NSD5 602 aa6.26□□□□□ -1.41
SF3B1-201ENST00000335508 ENPP5Q9UJA9 477 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms