RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 BEND4Q6ZU67 534 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 ZNF771Q7L3S4 317 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-202ENST00000331450 OR8D4Q8NGM9 314 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 ZNF519Q8TB69 540 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 RNASE6Q93091 150 aaKnown RBP14.17□□□□□ -0.14
LRRC28-202ENST00000331450 TSPAN32Q96QS1 320 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 RBM24Q9BX46 236 aaKnown RBP14.17□□□□□ -0.14
LRRC28-202ENST00000331450 PLA2G12AQ9BZM1 189 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 NDEL1Q9GZM8 345 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 EGLN3Q9H6Z9 239 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 NPDC1Q9NQX5 325 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-202ENST00000331450 IL20RAQ9UHF4 553 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 ADAM18Q9Y3Q7 739 aa14.17□□□□□ -0.14
LRRC28-202ENST00000331450 KLF2Q9Y5W3 355 aaPredicted RBP14.17□□□□□ -0.14
LRRC28-202ENST00000331450 OR6C65A6NJZ3 312 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 SLC43A1O75387 559 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 CLDN1O95832 211 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 BCL10O95999 233 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 IGHV3-9P01782 118 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 PGA4P0DJD7 388 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 PGA3P0DJD8 388 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 APEHP13798 732 aaKnown RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 GRNP28799 593 aaKnown RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 CCKARP32238 428 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 RPL4P36578 427 aaKnown RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 RPL27P61353 136 aaKnown RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 PPP2R2BQ00005 443 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 LGALS3BPQ08380 585 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 DPY19L2P2Q6ZN68 376 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 LINGO2Q7L985 606 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 HDDC2Q7Z4H3 204 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 ZDHHC13Q8IUH4 622 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 POMGNT2Q8NAT1 580 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 DNAJC9Q8WXX5 260 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 SLC25A44Q96H78 314 aaPredicted RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 SAMD8Q96LT4 415 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 POLDIP3Q9BY77 421 aaKnown RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 MRPL13Q9BYD1 178 aaKnown RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 ELOVL5Q9NYP7 299 aa14.16□□□□□ -0.14
LRRC28-202ENST00000331450 ZNF346Q9UL40 294 aaKnown RBP14.16□□□□□ -0.14
LRRC28-202ENST00000331450 SAC3D1A6NKF1 404 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 CENPBD1B2RD01 187 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 UPK3AO75631 287 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 SOX14O95416 240 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 TXNDC12O95881 172 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 IGFBP2P18065 325 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 SLC6A6P31641 620 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 CD79BP40259 229 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 DAPP51397 102 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 ERVK-25P63136 954 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 RUNX1T1Q06455 604 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 TOP3AQ13472 1001 aaPredicted RBP14.15□□□□□ -0.14
LRRC28-202ENST00000331450 CAMK2DQ13557 499 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 RCN1Q15293 331 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 HIST3H3Q16695 136 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 PHYHD1Q5SRE7 291 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 FAM205BPQ63HN1 556 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 KDM4DQ6B0I6 523 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 C20orf196Q8IYI0 205 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 ATG16L2Q8NAA4 619 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 ACBD4Q8NC06 268 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 ICA1LQ8NDH6 482 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 NOXO1Q8NFA2 376 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 TMEM54Q969K7 222 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 LRR1Q96L50 414 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 Q96M85 177 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 ALKBH3Q96Q83 286 aaPredicted RBP14.15□□□□□ -0.14
LRRC28-202ENST00000331450 KCNK17Q96T54 332 aa14.15□□□□□ -0.14
LRRC28-202ENST00000331450 STX18Q9P2W9 335 aaKnown RBP14.15□□□□□ -0.14
LRRC28-202ENST00000331450 TMEFF2Q9UIK5 374 aaPredicted RBP14.15□□□□□ -0.14
LRRC28-202ENST00000331450 ZNF726A6NNF4 738 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 RPL36A-HNRNPH2H7BZ11 118 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 C19orf84I3L1E1 186 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 BHLHE40O14503 412 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 ARPC3O15145 178 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 TRMUO75648 421 aaKnown RBP14.14□□□□□ -0.15
LRRC28-202ENST00000331450 PPP1R3DO95685 299 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 ITGA5P08648 1049 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 IGFBP1P08833 259 aaPredicted RBP14.14□□□□□ -0.15
LRRC28-202ENST00000331450 ACADSP16219 412 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 PSMB1P20618 241 aaKnown RBP14.14□□□□□ -0.15
LRRC28-202ENST00000331450 IGHV1-2P23083 117 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 SDHAP31040 664 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 FOXG1P55316 489 aaPredicted RBP14.14□□□□□ -0.15
LRRC28-202ENST00000331450 SORDQ00796 357 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 FAPQ12884 760 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 P2RY6Q15077 328 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 MESTQ5EB52 335 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 CARD17Q5XLA6 110 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 GPR139Q6DWJ6 353 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 STAC2Q6ZMT1 411 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 PARP8Q8N3A8 854 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 ARIH2OSQ8N7S6 290 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 MAGEE2Q8TD90 523 aaPredicted RBP14.14□□□□□ -0.15
LRRC28-202ENST00000331450 HDAC2Q92769 488 aaKnown RBP14.14□□□□□ -0.15
LRRC28-202ENST00000331450 ZNF566Q969W8 418 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 NMD3Q96D46 503 aaKnown RBP14.14□□□□□ -0.15
LRRC28-202ENST00000331450 ZNF570Q96NI8 536 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 PSMG3-AS1Q96PY0 264 aa14.14□□□□□ -0.15
LRRC28-202ENST00000331450 CIB1Q99828 191 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms