RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CBFBQ13951 182 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 YIF1BQ5BJH7 314 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 SLC6A19Q695T7 634 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 TSSK4Q6SA08 328 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 ZNF574Q6ZN55 896 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 DUSP19Q8WTR2 217 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 YIPF5Q969M3 257 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 OR11A1Q9GZK7 315 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 DUSP15Q9H1R2 295 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 GALNT9Q9HCQ5 603 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 FRRS1LQ9P0K9 344 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 SPATA2Q9UM82 520 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 CACNG2Q9Y698 323 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 TMED7-TICAM2A0A0A6YYA0 188 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 C2orf72A6NCS6 295 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 UBL3O95164 117 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 TIAF1O95411 115 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 TACSTD2P09758 323 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 SOX2P48431 317 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 CLDN12P56749 244 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 PLA1AQ53H76 456 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 EEF1A1P5Q5VTE0 462 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 GPR139Q6DWJ6 353 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 LRRC69Q6ZNQ3 347 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 PRSS45Q7RTY3 260 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 KANSL1Q7Z3B3 1105 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 NUP54Q7Z3B4 507 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 KMT5CQ86Y97 462 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 HAVCR2Q8TDQ0 301 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 CREB3L1Q96BA8 519 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 RNF170Q96K19 258 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 PLSCR3Q9NRY6 295 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 PAQR5Q9NXK6 330 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 TMED7Q9Y3B3 224 aa13.45□□□□□ -0.26
CLCNKA-201ENST00000331433 CPED1A4D0V7 1026 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 ZNF354AO60765 605 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 P2RX1P51575 399 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 RNF4P78317 190 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 ALKBH1Q13686 389 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 BCL2A1Q16548 175 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 NTRK2Q16620 822 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 ODF4Q2M2E3 257 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 MAMDC2Q7Z304 686 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 ADGRG3Q86Y34 549 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 BMPERQ8N8U9 685 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 PLPP5Q8NEB5 264 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 OR5AK2Q8NH90 309 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 GPR119Q8TDV5 335 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 THEM6Q8WUY1 208 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 METTL21AQ8WXB1 218 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 AMELYQ99218 206 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 MFRPQ9BY79 579 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 NDEL1Q9GZM8 345 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 PCDHGA9Q9Y5G4 932 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 MUC3AQ02505 3323 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 XKRYO14609 159 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 SDHBP21912 280 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 TCEA1P23193 301 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 ARRB1P49407 418 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 POLR2HP52434 150 aaKnown RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 ACKR1Q16570 336 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 NOXA1Q86UR1 476 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 CMTM4Q8IZR5 234 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 PHYHIPQ92561 330 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 CLDN23Q96B33 292 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 INTS14Q96SY0 518 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 NPAS1Q99742 590 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 FSCN3Q9NQT6 498 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 MCUBQ9NWR8 336 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 TAS2R10Q9NYW0 307 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 KCNG2Q9UJ96 466 aa13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
CLCNKA-201ENST00000331433 OR6C76A6NM76 312 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 IFITM5A6NNB3 132 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 ADAM10O14672 748 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 ALOX5APP20292 161 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 SGCBQ16585 318 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 FAM69AQ5T7M9 428 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 STPG1Q5TH74 334 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 C1orf140Q5VVS0 124 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 RHBDD2Q6NTF9 364 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 GUSBP11Q6P575 273 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 KCTD20Q7Z5Y7 419 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 OR10AC1Q8NH08 325 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 GCDHQ92947 438 aaPredicted RBP13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 KLHL15Q96M94 604 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 AUNIPQ9H7T9 357 aa13.43□□□□□ -0.26
CLCNKA-201ENST00000331433 TRAV6A0A075B6T7 132 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 OR6C70A6NIJ9 312 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 AIPO00170 330 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 NPIPB7O75200 414 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 HLA-DQA2P01906 255 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 CENPAP49450 140 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 MMP15P51511 669 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 FBXW4P57775 412 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 COL28A1Q2UY09 1125 aa13.42□□□□□ -0.26
CLCNKA-201ENST00000331433 Q499Y3 187 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms