RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 PLAURQ03405 335 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 RAB33AQ14088 237 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 SGCAQ16586 387 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
CD46-201ENST00000322875 ZNF547Q8IVP9 402 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 SLC35F3Q8IY50 421 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 GABRG1Q8N1C3 465 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 ZSCAN1Q8NBB4 408 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TMEM229BQ8NBD8 167 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 OR4C6Q8NH72 309 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 FGF13Q92913 245 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 ZMYND19Q96E35 227 aaPredicted RBP7.11□□□□□ -1.27
CD46-201ENST00000322875 AIF1LQ9BQI0 150 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 ACTRT3Q9BYD9 372 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 LAT2Q9GZY6 243 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 DPEP2Q9H4A9 486 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TMEM231Q9H6L2 316 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 UPB1Q9UBR1 384 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 CACFD1Q9UGQ2 172 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 PCDHGA1Q9Y5H4 931 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TRAV27A0A087WT01 109 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 GPR37O15354 613 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 VEGFDO43915 354 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 DUSP11O75319 330 aaKnown RBP7.11□□□□□ -1.27
CD46-201ENST00000322875 IFNGP01579 166 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 CTSLP07711 333 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 FCGR3AP08637 254 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TIMP2P16035 220 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 ACTR1BP42025 376 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 SLC11A1P49279 550 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 DIO1P49895 249 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TOMM20Q15388 145 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 OR1Q1Q15612 314 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 ZIC1Q15915 447 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 ARHGAP11BQ3KRB8 267 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 NKAPLQ5M9Q1 402 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TMEM200AQ86VY9 491 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 CCDC116Q8IYX3 515 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 NUP43Q8NFH3 380 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 OR2A12Q8NGT7 310 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 NUDCD2Q8WVJ2 157 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 NRTNQ99748 197 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 GGACTQ9BVM4 153 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 NMNAT2Q9BZQ4 307 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TSPAN10Q9H1Z9 355 aaPredicted RBP7.11□□□□□ -1.27
CD46-201ENST00000322875 OR52A5Q9H2C5 316 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 MRPS30Q9NP92 439 aaKnown RBP7.11□□□□□ -1.27
CD46-201ENST00000322875 PRMT8Q9NR22 394 aaPredicted RBP7.11□□□□□ -1.27
CD46-201ENST00000322875 LPAR3Q9UBY5 353 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TICRRQ7Z2Z1 1910 aa7.11□□□□□ -1.27
CD46-201ENST00000322875 TBC1D3KA0A087X1G2 549 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 C9JQL5 133 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 F5H0A9 414 aaPredicted RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 PRAMEF26H0Y7S4 382 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 UPK3AO75631 287 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 AK1P00568 194 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 RPN2P04844 631 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 MPZP25189 248 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 AVPR2P30518 371 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 MC3RP41968 323 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 PPICP45877 212 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 COL9A2Q14055 689 aaPredicted RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 TAF13Q15543 124 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 Q499Y3 187 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 YOD1Q5VVQ6 348 aaPredicted RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 FAM166AQ6J272 317 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 ARHGAP11AQ6P4F7 1023 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 UNQ6126/PRO20091Q6UXV3 157 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 DPPA4Q7L190 304 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 TMCO2Q7Z6W1 182 aaPredicted RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 BAP18Q8IXM2 172 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 OR13C8Q8NGS7 320 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 SNX33Q8WV41 574 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 MRGPRFQ96AM1 343 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 FBXO17Q96EF6 278 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 SAT2Q96F10 170 aaPredicted RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 RBM18Q96H35 190 aaKnown RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 MNTQ99583 582 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 SPSB2Q99619 263 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 SYNPO2LQ9H987 977 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 TRPV4Q9HBA0 871 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 RHOFQ9HBH0 211 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 SLC17A5Q9NRA2 495 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 FBXO4Q9UKT5 387 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 RPH3AQ9Y2J0 694 aaPredicted RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 EML5Q05BV3 1969 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 LRRK1Q38SD2 2015 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 TRAV8-7A0A075B6U6 113 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 GLOD5A6NK44 160 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 MFNGO00587 321 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 CLEC3AO75596 197 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 SLC34A2O95436 690 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 SFTA3P0C7M3 94 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 LYL1P12980 280 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
CD46-201ENST00000322875 CAPZA1P52907 286 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 CLDN2P57739 230 aa7.1□□□□□ -1.27
CD46-201ENST00000322875 ARHGAP19Q14CB8 494 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms