RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TAF13Q15543 124 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 HYAL4Q2M3T9 481 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 LY6G6FQ5SQ64 297 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 LIPNQ5VXI9 398 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 STEAP1BQ6NZ63 245 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 PUSL1Q8N0Z8 303 aaKnown RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 CAMKVQ8NCB2 501 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 RPS4Y2Q8TD47 263 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 CCDC107Q8WV48 283 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 MYADMQ96S97 322 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 VRK1Q99986 396 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 UQCC2Q9BRT2 126 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 RSPH9Q9H1X1 276 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 PIGMQ9H3S5 423 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 STEAP1Q9UHE8 339 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 GPN3Q9UHW5 284 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 CTAG2O75638 210 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 PVALBP20472 110 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 PRSS3P35030 304 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 RBM34P42696 430 aaKnown RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 EMDP50402 254 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 VASPP50552 380 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 ALKBH1Q13686 389 aaKnown RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 KCNAB1Q14722 419 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 HFEQ30201 348 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 JMJD6Q6NYC1 403 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 ANKRD16Q6P6B7 361 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 ASB13Q8WXK3 278 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 RNF166Q96A37 237 aaPredicted RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 ADAD1Q96M93 576 aaKnown RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 ADAT1Q9BUB4 502 aaKnown RBP16.31■□□□□ 0.2
PRKCB-202ENST00000321728 PDCD10Q9BUL8 212 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 ALG12Q9BV10 488 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 FRRS1LQ9P0K9 344 aa16.31■□□□□ 0.2
PRKCB-202ENST00000321728 DENND4AQ7Z401 1863 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 BRINP1O60477 761 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 PMS2P2O95744 297 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 ADH1AP07327 375 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 CEBPBP17676 345 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 PSMD4P55036 377 aaKnown RBP16.3■□□□□ 0.2
PRKCB-202ENST00000321728 HTRA4P83105 476 aaPredicted RBP16.3■□□□□ 0.2
PRKCB-202ENST00000321728 RUNX2Q13950 521 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 SLC35D3Q5M8T2 416 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 SLC6A19Q695T7 634 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 RAB11FIP2Q7L804 512 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 CBLN2Q8IUK8 224 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 TMEFF1Q8IYR6 380 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 SVBPQ8N300 66 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 SLC43A2Q8N370 569 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 KCNRGQ8N5I3 272 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 FGF13Q92913 245 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF426Q9BUY5 554 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 KCNK15Q9H427 330 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 TMEM74BQ9NUR3 256 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 ASF1BQ9NVP2 202 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 KNL1Q8NG31 2342 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 TMEM82A0PJX8 343 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 KCNJ13O60928 360 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 RAB13P51153 203 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 GUCA2BQ16661 112 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 GLT8D1Q68CQ7 371 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 USP53Q70EK8 1073 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 LDLRAD3Q86YD5 345 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 TMEM106AQ96A25 262 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 CCDC74AQ96AQ1 378 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 TSSK2Q96PF2 358 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 TRIM2Q9C040 744 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 ESRP2Q9H6T0 727 aaKnown RBP16.3■□□□□ 0.2
PRKCB-202ENST00000321728 MKKSQ9NPJ1 570 aaPredicted RBP16.3■□□□□ 0.2
PRKCB-202ENST00000321728 COMMD9Q9P000 198 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 UPB1Q9UBR1 384 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 ZMAT5Q9UDW3 170 aaKnown RBP16.3■□□□□ 0.2
PRKCB-202ENST00000321728 IKZF2Q9UKS7 526 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 PCDHB10Q9UN67 800 aa16.3■□□□□ 0.2
PRKCB-202ENST00000321728 TICRRQ7Z2Z1 1910 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 OR14I1A6ND48 311 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 C4orf47A7E2U8 309 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 F8W036 122 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 BCL2L11O43521 198 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 FBXO45P0C2W1 286 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 CSF2RBP32927 897 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 PPIAP62937 165 aaKnown RBP16.29■□□□□ 0.2
PRKCB-202ENST00000321728 IRF4Q15306 451 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 FHL5Q5TD97 284 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 NKAIN2Q5VXU1 208 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF425Q6IV72 752 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 LEG1Q6P5S2 330 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 DPY19L2P2Q6ZN68 376 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF676Q8N7Q3 588 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 OR4E2Q8NGC2 313 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 OR1S2Q8NGQ3 325 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 OR10AC1Q8NH08 325 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 RSPRY1Q96DX4 576 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 KLHDC2Q9Y2U9 406 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 GLCEO94923 617 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 H2AFB1P0C5Y9 115 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 SLC35G6P0C7Q6 338 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 SNTB1Q13884 538 aaKnown RBP16.29■□□□□ 0.2
PRKCB-202ENST00000321728 SERTAD2Q14140 314 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 PAN3Q58A45 887 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms