RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
TRIM25-201ENST00000316881 HES7Q9BYE0 225 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 ACKR4Q9NPB9 350 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 LANCL2Q9NS86 450 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 COL18A1P39060 1754 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 NFYAP23511 347 aaPredicted RBP13.18□□□□□ -0.3
TRIM25-201ENST00000316881 C21orf33P30042 268 aaPredicted RBP13.18□□□□□ -0.3
TRIM25-201ENST00000316881 SMN1Q16637 294 aaKnown RBP13.18□□□□□ -0.3
TRIM25-201ENST00000316881 WDR5BQ86VZ2 330 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 LRRC28Q86X40 367 aaPredicted RBP13.18□□□□□ -0.3
TRIM25-201ENST00000316881 INTS12Q96CB8 462 aaKnown RBP13.18□□□□□ -0.3
TRIM25-201ENST00000316881 SGPP1Q9BX95 441 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 SERTAD4Q9NUC0 356 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 METTL12A8MUP2 240 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 VEGFCP49767 419 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 C9orf152Q5JTZ5 239 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 RBMS3Q6XE24 437 aaKnown RBP13.18□□□□□ -0.3
TRIM25-201ENST00000316881 SLC46A3Q7Z3Q1 461 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 CCDC28AQ8IWP9 274 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 MS4A6EQ96DS6 147 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 TRIB1Q96RU8 372 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 PPA2Q9H2U2 334 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 OR51B4Q9Y5P0 310 aa13.18□□□□□ -0.3
TRIM25-201ENST00000316881 GASTP01350 101 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 HTR2CP28335 458 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 RAD52P43351 418 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 EPHA5P54756 1037 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 TAS2R30P59541 319 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 USF2Q15853 346 aaPredicted RBP13.17□□□□□ -0.3
TRIM25-201ENST00000316881 CCSMST1Q4G0I0 132 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 OR52W1Q6IF63 320 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 CCDC74BQ96LY2 380 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 CD22P20273 847 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 LINC00346Q8IVM7 164 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 GLB1L2Q8IW92 636 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 ZNF583Q96ND8 569 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 LYSMD1Q96S90 227 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 CSF3RQ99062 836 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 NMNAT2Q9BZQ4 307 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 SELENOIQ9C0D9 397 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 CHRNA9Q9UGM1 479 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 HSPB6O14558 160 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 CRYAAP02489 173 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 PTAFRP25105 342 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 UBE2NLQ5JXB2 153 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 BPIFB2Q8N4F0 458 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 SLC16A11Q8NCK7 471 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 TAAR9Q96RI9 348 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 RTL8AQ9BWD3 113 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 MMP28Q9H239 520 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
TRIM25-201ENST00000316881 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 NXNL2Q5VZ03 156 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 GDF7Q7Z4P5 450 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 ZNF679Q8IYX0 411 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 SLC22A24Q8N4F4 322 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 KCNE4Q8WWG9 221 aa13.17□□□□□ -0.3
TRIM25-201ENST00000316881 SGCEO43556 437 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 GRPP07492 148 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 MAKP20794 623 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 BLVRBP30043 206 aaPredicted RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 FOXK2Q01167 660 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 SCGB2A2Q13296 93 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 ZNF750Q32MQ0 723 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 LEXMQ3ZCV2 418 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 NHSL2Q5HYW2 709 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 KHDC1LQ5JSQ8 128 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 C12orf45Q8N5I9 185 aaPredicted RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 GGHQ92820 318 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 FGF14Q92915 247 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 ARL11Q969Q4 196 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 WNT16Q9UBV4 365 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 CD300AQ9UGN4 299 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 PLPP1O14494 284 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 CSO75390 466 aaKnown RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 AKR7A3O95154 331 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 GPR3P46089 330 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 PPP2CBP62714 309 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 PPP2CAP67775 309 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 Q499Y3 187 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 FUNDC1Q8IVP5 155 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 OR14A2Q96R54 314 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 C19orf53Q9UNZ5 99 aaPredicted RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 CRYABP02511 175 aaKnown RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 NDUFB7P17568 137 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 THBS3P49746 956 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 HTD2P86397 168 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 TNK1Q13470 666 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 ZNF836Q6ZNA1 936 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 Q6ZSR9 355 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 CYP4V2Q6ZWL3 525 aaPredicted RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 PATE1Q8WXA2 126 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 HRASLS5Q96KN8 279 aa13.16□□□□□ -0.3
TRIM25-201ENST00000316881 PPIL3Q9H2H8 161 aaKnown RBP13.16□□□□□ -0.3
TRIM25-201ENST00000316881 TMEM38AQ9H6F2 299 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms