RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ECHDC3Q96DC8 303 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 JSRP1Q96MG2 331 aaPredicted RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 SMIM14Q96QK8 99 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 C2orf88Q9BSF0 95 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 FOXQ1Q9C009 403 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 SPACA1Q9HBV2 294 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 SLC25A19Q9HC21 320 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 FARSAQ9Y285 508 aaKnown RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 PCDHB1Q9Y5F3 818 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 KIAA1549LQ6ZVL6 1849 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 C7orf77A4D0Y5 90 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR2C1O95371 312 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 SKP1P63208 163 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 PJVKQ0ZLH3 352 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 DOC2AQ14183 400 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 TRIM46Q7Z4K8 759 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 LRP11Q86VZ4 500 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR4D9Q8NGE8 314 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 C5orf34Q96MH7 638 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 NECAB3Q96P71 396 aaPredicted RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 CCNL2Q96S94 520 aaPredicted RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 ATG10Q9H0Y0 220 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 FBRSQ9HAH7 460 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZFYVE1Q9HBF4 777 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 FAM120CQ9NX05 1096 aaKnown RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 MIA3Q5JRA6 1907 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 A0A1W2PPE2 198 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 SHISA7A6NL88 538 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 ATP1B1P05026 303 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 BCHEP06276 602 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 DHPSP49366 369 aaPredicted RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 CST6Q15828 149 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 RPE65Q16518 533 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 AWAT1Q58HT5 328 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZNF626Q68DY1 528 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 Q6ZS52 159 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 MUC20Q8N307 709 aaPredicted RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR56B1Q8NGI3 324 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR10J5Q8NHC4 309 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 HPSE2Q8WWQ2 592 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 OSTF1Q92882 214 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 NDC1Q9BTX1 674 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 POPDC3Q9HBV1 291 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 KCNJ16Q9NPI9 418 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 MIEF1Q9NQG6 463 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 EXOSC3Q9NQT5 275 aaKnown RBP10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 MMP17Q9ULZ9 603 aa10.73□□□□□ -0.69
LDLRAD3-201ENST00000315571 NPIPA7E9PJI5 369 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 BCL2L11O43521 198 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 ADH1BP00325 375 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 MMP7P09237 267 aaPredicted RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 NPIPA8P0DM63 369 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 RPA2P15927 270 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 FGF7P21781 194 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 CD34P28906 385 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 PNLIPRP2P54317 469 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 STARD6P59095 220 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 RNASE10Q5GAN6 216 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR2T2Q6IF00 324 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 EIF5AL1Q6IS14 154 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 PARS2Q7L3T8 475 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 FCRLAQ7L513 359 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 RNF113BQ8IZP6 322 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 ACBD7Q8N6N7 88 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 THEM6Q8WUY1 208 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 SMPDL3BQ92485 455 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 NRIP2Q9BQI9 281 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 ELOVL1Q9BW60 279 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZDHHC5Q9C0B5 715 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 EGLN3Q9H6Z9 239 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 TUBG2Q9NRH3 451 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 GPATCH2Q9NW75 528 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 ZNF282Q9UDV7 671 aaPredicted RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 FBXL4Q9UKA2 621 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 SNRPGP15A8MWD9 76 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 KCNAB3O43448 404 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 SCGNO76038 276 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 TSPAN15O95858 294 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 IDSP22304 550 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 CDX1P47902 265 aaPredicted RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 GSK3AP49840 483 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 STXBP1P61764 594 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 VHLLQ6RSH7 139 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 ENPP7Q6UWV6 458 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 LAS2Q8IYD9 372 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 KCNRGQ8N5I3 272 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR4K5Q8NGD3 323 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 OR5W2Q8NH69 310 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 NEK7Q8TDX7 302 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 ARRDC3Q96B67 414 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 DOK5Q9P104 306 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 B4GALT6Q9UBX8 382 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 NPTNQ9Y639 398 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 SCAF4O95104 1147 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 LPOP22079 712 aaPredicted RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 CALCRP30988 508 aa10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 RPS26P62854 115 aaKnown RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 RPS26P11Q5JNZ5 115 aaPredicted RBP10.72□□□□□ -0.69
LDLRAD3-201ENST00000315571 DBX2Q6ZNG2 339 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms