RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CDH24Q86UP0 819 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 ZDHHC21Q8IVQ6 265 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 C20orf196Q8IYI0 205 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 OR4K5Q8NGD3 323 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 OR9Q2Q8NGE9 314 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 OR1K1Q8NGR3 316 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 OR6S1Q8NH40 331 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 ACOT11Q8WXI4 607 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 HDAC2Q92769 488 aaKnown RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 EVA1AQ9H8M9 152 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 LOC102725191A0A1B0GVB3 256 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 M0R1B8 84 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 CDAP32320 146 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 NCMAPQ5T1S8 102 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 PGM2L1Q6PCE3 622 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 KLHL24Q6TFL4 600 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 B3GLCTQ6Y288 498 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 MBOAT2Q6ZWT7 520 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 DHFR2Q86XF0 187 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 BCL2L2Q92843 193 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 MS4A3Q96HJ5 214 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 PIP5K1AQ99755 562 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 SLC19A3Q9BZV2 496 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 ZNF224Q9NZL3 707 aa10.53□□□□□ -0.72
SCFD1-201ENST00000311943 ZNF346Q9UL40 294 aaKnown RBP10.53□□□□□ -0.72
SCFD1-201ENST00000311943 EFCAB9A8MZ26 197 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 ABCD4O14678 606 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 GSC2O15499 205 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 SLC43A1O75387 559 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 GMNNO75496 209 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 HLA-HP01893 362 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 HIST1H2ABP04908 130 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 FABP3P05413 133 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 TSPAN19P0C672 248 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 PGA4P0DJD7 388 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 PGA3P0DJD8 388 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 THRBP10828 461 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 RHCEP18577 417 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 LIMS1P48059 325 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 MNAT1P51948 309 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 ERVK-25P63136 954 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 MFSD13AQ14CX5 517 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 ETFDHQ16134 617 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 TIMM23BQ5SRD1 257 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 ARMC4Q5T2S8 1044 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 LCN8Q6JVE9 175 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF704Q6ZNC4 412 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-201ENST00000311943 HIST3H2AQ7L7L0 130 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 TMEM179BQ7Z7N9 219 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 OAFQ86UD1 273 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 HS3ST5Q8IZT8 346 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 ADPRHL1Q8NDY3 354 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 OR6N1Q8NGY5 312 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 CANT1Q8WVQ1 401 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 HIST1H2ACQ93077 130 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 DHRS1Q96LJ7 313 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 TSPAN32Q96QS1 320 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 BTBD10Q9BSF8 475 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 HDHD5Q9BXW7 423 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 C1orf21Q9H246 121 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 IL1RAPQ9NPH3 570 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 SLC17A5Q9NRA2 495 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 SLC7A8Q9UHI5 535 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 ST6GALNAC2Q9UJ37 374 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 NOX1Q9Y5S8 564 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 RAI1Q7Z5J4 1906 aaPredicted RBP10.52□□□□□ -0.73
SCFD1-201ENST00000311943 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
SCFD1-201ENST00000311943 A0A1W2PRQ8 180 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 SH3PXD2BA1X283 911 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF587BE7ETH6 402 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 TRMUO75648 421 aaKnown RBP10.51□□□□□ -0.73
SCFD1-201ENST00000311943 GADD45GO95257 159 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 CTXN1P60606 82 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 RPS4XP62701 263 aaKnown RBP10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ZP4Q12836 540 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 DGCR6Q14129 220 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ALG10Q5BKT4 473 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 HMBOX1Q6NT76 420 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ADGRG5Q8IZF4 528 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 GPR137CQ8N3F9 429 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 POMGNT2Q8NAT1 580 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ASB10Q8WXI3 467 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 HSD17B8Q92506 261 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 AKAP1Q92667 903 aaKnown RBP eCLIP10.51□□□□□ -0.73
SCFD1-201ENST00000311943 Q96M85 177 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 HS6ST2Q96MM7 605 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 SH3GL3Q99963 347 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 FANCFQ9NPI8 374 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 NDE1Q9NXR1 346 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 AURKCQ9UQB9 309 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 POMPQ9Y244 141 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 RCE1Q9Y256 329 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 HIF3AQ9Y2N7 669 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 FAM32AQ9Y421 112 aaKnown RBP10.51□□□□□ -0.73
SCFD1-201ENST00000311943 RTTNQ86VV8 2226 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF726A6NNF4 738 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
SCFD1-201ENST00000311943 CNOT4O95628 575 aaKnown RBP10.51□□□□□ -0.73
SCFD1-201ENST00000311943 GPANK1O95872 356 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms