RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 FASNP49327 2511 aaKnown RBP11.39□□□□□ -0.59
APTX-201ENST00000309615 ZNF726A6NNF4 738 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 UPK3AO75631 287 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 IGHMP01871 453 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 GRNP28799 593 aaKnown RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 COX10Q12887 443 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 CLEC12AQ5QGZ9 265 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 ARMC4Q5T2S8 1044 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 FBXW9Q5XUX1 488 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 DPY19L2P2Q6ZN68 376 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 Q6ZT83 130 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 OR6X1Q8NH79 312 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 GPX7Q96SL4 187 aaPredicted RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 CIB1Q99828 191 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 ZNF556Q9HAH1 456 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 IL20Q9NYY1 176 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 KIF17Q9P2E2 1029 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 REV1Q9UBZ9 1251 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 ZNF346Q9UL40 294 aaKnown RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 CDH10Q9Y6N8 788 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 DOPEY1Q5JWR5 2465 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 NPIPB13A6NJU9 1138 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 NPIPB4C9JG80 1138 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 AKAP8O43823 692 aaKnown RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 SLC43A1O75387 559 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 ANPEPP15144 967 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 RPL27P61353 136 aaKnown RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 FAM27E3Q08E93 113 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 FBXL19-AS1Q494R0 122 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 SLC36A3Q495N2 470 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 PHYHD1Q5SRE7 291 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 BEND4Q6ZU67 534 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 FAM122BQ7Z309 247 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 GABRG1Q8N1C3 465 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 OR8D4Q8NGM9 314 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 SLC25A44Q96H78 314 aaPredicted RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 Q96M85 177 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 ADAD1Q96M93 576 aaKnown RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 ALKBH3Q96Q83 286 aaPredicted RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 NDEL1Q9GZM8 345 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 GABARAPL1Q9H0R8 117 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 NRIP3Q9NQ35 241 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 NPDC1Q9NQX5 325 aaPredicted RBP11.38□□□□□ -0.59
APTX-201ENST00000309615 GRHPRQ9UBQ7 328 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 UPB1Q9UBR1 384 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 MALT1Q9UDY8 824 aa11.38□□□□□ -0.59
APTX-201ENST00000309615 A1L4Q6 167 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 C19orf84I3L1E1 186 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 PPP1R3DO95685 299 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 CLDN1O95832 211 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 PGA4P0DJD7 388 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 PGA3P0DJD8 388 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 SLC6A6P31641 620 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 ACVR1BP36896 505 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 FOXG1P55316 489 aaPredicted RBP11.37□□□□□ -0.59
APTX-201ENST00000309615 FAPQ12884 760 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 LINGO2Q7L985 606 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 CXorf67Q86X51 503 aaPredicted RBP11.37□□□□□ -0.59
APTX-201ENST00000309615 C20orf196Q8IYI0 205 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 CLDN22Q8N7P3 220 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 POMGNT2Q8NAT1 580 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 SYT14Q8NB59 555 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 ZNF519Q8TB69 540 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 ZNF566Q969W8 418 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 RASD2Q96D21 266 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 IFT27Q9BW83 186 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 PAPOLBQ9NRJ5 636 aaKnown RBP11.37□□□□□ -0.59
APTX-201ENST00000309615 TBC1D23Q9NUY8 699 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 ASB6Q9NWX5 421 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 FOXD3Q9UJU5 478 aaPredicted RBP11.37□□□□□ -0.59
APTX-201ENST00000309615 IER3IP1Q9Y5U9 82 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
APTX-201ENST00000309615 ALPK2Q86TB3 2170 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 TEX13CA0A0J9YWL9 993 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 H0YHG0 523 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 H3BN98 237 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 M0R3G1 203 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 MITFO75030 526 aaPredicted RBP11.36□□□□□ -0.59
APTX-201ENST00000309615 TRMUO75648 421 aaKnown RBP11.36□□□□□ -0.59
APTX-201ENST00000309615 KRT33AO76009 404 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 CNOT4O95628 575 aaKnown RBP11.36□□□□□ -0.59
APTX-201ENST00000309615 ACADSP16219 412 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 IGHV1-2P23083 117 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 SDHAP31040 664 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 CD79BP40259 229 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 PPP2R2BQ00005 443 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 C9orf135Q5VTT2 229 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 KDM4DQ6B0I6 523 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 STAC2Q6ZMT1 411 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 GPR137CQ8N3F9 429 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 ARIH2OSQ8N7S6 290 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 OR52L1Q8NGH7 329 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 OR6N1Q8NGY5 312 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 HDAC2Q92769 488 aaKnown RBP11.36□□□□□ -0.59
APTX-201ENST00000309615 RNASE6Q93091 150 aaKnown RBP11.36□□□□□ -0.59
APTX-201ENST00000309615 ZNF570Q96NI8 536 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 ERMAPQ96PL5 475 aaPredicted RBP11.36□□□□□ -0.59
APTX-201ENST00000309615 TSSK6Q9BXA6 273 aa11.36□□□□□ -0.59
APTX-201ENST00000309615 OSBPL10Q9BXB5 764 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms