RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 YIF1BQ5BJH7 314 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 GALNT9Q9HCQ5 603 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 TCRBP04435 133 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 FCGR2AP12318 317 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 EVI2BP34910 448 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 HOXD12P35452 270 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 CX3CR1P49238 355 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 MTCP1P56278 107 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 YBX1P67809 324 aaKnown RBP9.11□□□□□ -0.95
TMOD3-201ENST00000308580 LIPNQ5VXI9 398 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 FAHD1Q6P587 224 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 OR6V1Q8N148 313 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 LILRB2Q8N423 598 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 PAPOLGQ9BWT3 736 aaKnown RBP9.11□□□□□ -0.95
TMOD3-201ENST00000308580 GON7Q9BXV9 100 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 TEX101Q9BY14 249 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 LIN7BQ9HAP6 207 aa9.11□□□□□ -0.95
TMOD3-201ENST00000308580 COL4A1P02462 1669 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 B4DXG7 233 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 F8W036 122 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 LINC01565O15544 149 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PLRG1O43660 514 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 EFNA3P52797 238 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 BLOC1S1P78537 153 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SORDQ00796 357 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 GRINAQ7Z429 371 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PBDC1Q9BVG4 233 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ANKRD10Q9NXR5 420 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 BOLA1Q9Y3E2 137 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PCDHGA1Q9Y5H4 931 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ZNF14P17017 642 aaPredicted RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CASP6P55212 293 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 DUSP8Q13202 625 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 RUNX2Q13950 521 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 FCN2Q15485 313 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PLPP7Q8NBV4 271 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 TMEM185AQ8NFB2 350 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 TCEAL3Q969E4 200 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ARL11Q969Q4 196 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CMSS1Q9BQ75 279 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CMC2Q9NRP2 79 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ACOXLQ9NUZ1 547 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 WIF1Q9Y5W5 379 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 RREB1Q92766 1687 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 NSA2O95478 260 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 RBM39Q14498 530 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SLC35D3Q5M8T2 416 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CPT1CQ8TCG5 803 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ALG14Q96F25 216 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ZNF649Q9BS31 505 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PHF7Q9BWX1 381 aaPredicted RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SMIM3Q9BZL3 60 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SIAEQ9HAT2 523 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PADI1Q9ULC6 663 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 EIF4E2O60573 245 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PAPLNO95428 1278 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 OLFM2O95897 454 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 HCCSP53701 268 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 RRAS2P62070 204 aaPredicted RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 GLYATL3Q5SZD4 288 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ZNF546Q86UE3 836 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 HSD17B8Q92506 261 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 TSLPQ969D9 159 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CEP290O15078 2479 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 M0R082 166 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ATP1B1P05026 303 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SRMP19623 302 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CCR6P51684 374 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PSPHP78330 225 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SLC36A2Q495M3 483 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 AKR1C8PQ5T2L2 129 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SLC16A9Q7RTY1 509 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CA13Q8N1Q1 262 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 BCORP1Q8N888 145 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 DNAAF1Q8NEP3 725 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 DNAJB11Q9UBS4 358 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 DPM1O60762 260 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SLC2A1P11166 492 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 HIST1H1CP16403 213 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 MRPL19P49406 292 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 ARF1P84077 181 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SLC43A2Q8N370 569 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 OR56B1Q8NGI3 324 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 OR4K15Q8NH41 348 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PHYHIPQ92561 330 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 RAB3CQ96E17 227 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 METTL9Q9H1A3 318 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 MRPS28Q9Y2Q9 187 aaKnown RBP9.1□□□□□ -0.95
TMOD3-201ENST00000308580 UGT2A1Q9Y4X1 527 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 PRAMEF25A6NGN4 478 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 IDSB3KWA1 339 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 FABP7O15540 132 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 IFNA1P01562 189 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 DCXRQ7Z4W1 244 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 CAMKMTQ7Z624 323 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 C16orf52Q8NHV5 167 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 SLC25A46Q96AG3 418 aa9.1□□□□□ -0.95
TMOD3-201ENST00000308580 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms