RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 P2RX1P51575 399 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 ISL1P61371 349 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 KRBOX4Q5JUW0 171 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 PRAMEF9Q5VWM5 478 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 LINC00696Q6ZRV3 163 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 H1FNTQ75WM6 255 aaPredicted RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 OR1J2Q8NGS2 313 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 SLC25A43Q8WUT9 341 aaPredicted RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 SLC25A31Q9H0C2 315 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 MUTYHQ9UIF7 546 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 SH3BGRL2Q9UJC5 107 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 TRIM64BA6NI03 449 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 GPR171O14626 319 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 GPR137BO60478 399 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 NSA2O95478 260 aaKnown RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 CTSLP07711 333 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 TCN2P20062 427 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 CLVS2Q5SYC1 327 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 SH2D5Q6ZV89 423 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 ESX1Q8N693 406 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 TMEM178AQ8NBL3 297 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 GABARAPL1Q9H0R8 117 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 PPA2Q9H2U2 334 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 CLEC2DQ9UHP7 191 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 LHX6Q9UPM6 363 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 FGF17O60258 216 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 HOXB5P09067 269 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 PIPP12273 146 aaPredicted RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 PGAP1Q75T13 922 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 PATE1Q8WXA2 126 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 CCDC74AQ96AQ1 378 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 LINC00615Q96LM1 132 aaPredicted RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 MKRN2Q9H000 416 aaKnown RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 OR14J1Q9UGF5 321 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 CXorf51AA0A1B0GTR3 108 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 SURF4O15260 269 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 SLC34A2O95436 690 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 SLC14A1Q13336 389 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 IDO2Q6ZQW0 420 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 OR5T1Q8NG75 326 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 OR14K1Q8NGZ2 314 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 MRGPRX1Q96LB2 322 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 Q96M85 177 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 CALHM2Q9HA72 323 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 ATP13A2Q9NQ11 1180 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 MARF1Q9Y4F3 1742 aaKnown RBP14.66□□□□□ -0.06
USP42-201ENST00000306177 CYB561P49447 251 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 ZMAT1Q5H9K5 638 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 STK35Q8TDR2 534 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 DYNLRB1Q9NP97 96 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 STEAP1Q9UHE8 339 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 A0A1B0GVG6 124 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 KLRC4-KLRK1H3BQV0 150 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 LCMT2O60294 686 aaKnown RBP14.66□□□□□ -0.06
USP42-201ENST00000306177 SELENOFO60613 162 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 APOBEC1P41238 236 aaKnown RBP14.66□□□□□ -0.06
USP42-201ENST00000306177 PPP2CBP62714 309 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 PPP2CAP67775 309 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 SYT14P1Q58G82 188 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 NANOGP1Q8N7R0 232 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 ZNF419Q96HQ0 510 aaPredicted RBP14.66□□□□□ -0.06
USP42-201ENST00000306177 PTTG3PQ9NZH4 202 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 NPFFR2Q9Y5X5 522 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 TSPAN11A1L157 253 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 TMEM221A6NGB7 291 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 ZNF814B7Z6K7 855 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 MCRIP1C9JLW8 97 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 PAPLNO95428 1278 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 IFNA4P05014 189 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 CD22P20273 847 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 RPS18P62269 152 aaKnown RBP14.66□□□□□ -0.06
USP42-201ENST00000306177 NKAIN3Q8N8D7 197 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 OR7G2Q8NG99 324 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 GOT1L1Q8NHS2 421 aaPredicted RBP14.66□□□□□ -0.06
USP42-201ENST00000306177 HSD17B8Q92506 261 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 UBE2FQ969M7 185 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 DUS3LQ96G46 650 aaKnown RBP14.66□□□□□ -0.06
USP42-201ENST00000306177 CDCP1Q9H5V8 836 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 LIN7BQ9HAP6 207 aa14.66□□□□□ -0.06
USP42-201ENST00000306177 IGHV3-20A0A0C4DH32 117 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 TMEM129A0AVI4 362 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 ZNF587BE7ETH6 402 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 PEX11BO96011 259 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 FKBP2P26885 142 aaKnown RBP14.65□□□□□ -0.06
USP42-201ENST00000306177 APEX1P27695 318 aaKnown RBP14.65□□□□□ -0.06
USP42-201ENST00000306177 KCNAB1Q14722 419 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 STEAP3Q658P3 488 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 ZNF813Q6ZN06 617 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 LIMS2Q7Z4I7 341 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 SNX18Q96RF0 628 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 SIAEQ9HAT2 523 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 OR52A1Q9UKL2 312 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 YARS2Q9Y2Z4 477 aaKnown RBP14.65□□□□□ -0.06
USP42-201ENST00000306177 A0A087WUU8 490 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 ABHD16AO95870 558 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 RPL27P61353 136 aaKnown RBP14.65□□□□□ -0.06
USP42-201ENST00000306177 SLC9A3R2Q15599 337 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 AADACL4Q5VUY2 407 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 CAMKMTQ7Z624 323 aa14.65□□□□□ -0.06
USP42-201ENST00000306177 TMEM185AQ8NFB2 350 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms