RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 TRAM1Q15629 374 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 GPR68Q15743 365 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 MAPK14Q16539 360 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TRMT12Q53H54 448 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 MRPL2Q5T653 305 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF613Q6PF04 617 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CNIH2Q6PI25 160 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 POMZP3Q6PJE2 187 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 WDR88Q6ZMY6 472 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TMEM91Q6ZNR0 172 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 GALNTL5Q7Z4T8 443 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 GALNT12Q8IXK2 581 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ZFP41Q8N8Y5 198 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 DUSP18Q8NEJ0 188 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ITLN2Q8WWU7 325 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 KISS1RQ969F8 398 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CTHRC1Q96CG8 243 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 KCTD12Q96CX2 325 aaKnown RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 MVB12AQ96EY5 273 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 PEX11GQ96HA9 241 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CCDC120Q96HB5 630 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 IMMP1LQ96LU5 166 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 RNF121Q9H920 327 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 NPDC1Q9NQX5 325 aaPredicted RBP7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CMC2Q9NRP2 79 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 PPP1R14DQ9NXH3 145 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TEKT2Q9UIF3 430 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 TINAGQ9UJW2 476 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 NPIPA1Q9UND3 350 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 BAIAP2Q9UQB8 552 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 SPEF1Q9Y4P9 236 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 CELSR2Q9HCU4 2923 aa7.1□□□□□ -1.27
TM4SF1-201ENST00000305366 ITPR2Q14571 2701 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SHISA3A0PJX4 238 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC22A31A6NKX4 558 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 CYR61O00622 381 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 RNF13O43567 381 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 IDH3BO43837 385 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 DNAJB6O75190 326 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 RDH16O75452 317 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 NKX2-2O95096 273 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 GPR75O95800 540 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 FAM157BP0CG42 384 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 MAKP20794 623 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 S100A1P23297 94 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 CD96P40200 585 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 MAP2K3P46734 347 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 NKX2-5P52952 324 aaPredicted RBP7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 TAS2R43P59537 309 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 RBPJQ06330 500 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 MGAT2Q10469 447 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 PPA1Q15181 289 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SF3B4Q15427 424 aaKnown RBP eCLIP7.09□□□□□ -1.277e-7■□□□□ 10.8
TM4SF1-201ENST00000305366 NSDHLQ15738 373 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 TAB1Q15750 504 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 C3AR1Q16581 482 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 PRICKLE4Q2TBC4 344 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF791Q3KP31 576 aaPredicted RBP7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 KRBOX4Q5JUW0 171 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 ACER2Q5QJU3 275 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 CCNJQ5T5M9 372 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 LIN54Q6MZP7 749 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SMARCD3Q6STE5 483 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 TMEM205Q6UW68 189 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 C3P1Q6ZMU1 363 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 ANKRD37Q7Z713 158 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 KLBQ86Z14 1044 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 GRAMD2AQ8IUY3 354 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 OR4N5Q8IXE1 308 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 GPALPP1Q8IXQ4 340 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 CDK20Q8IZL9 346 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 COX18Q8N8Q8 333 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 OR5T3Q8NGG3 340 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC2A12Q8TD20 617 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 ADAMTS18Q8TE60 1221 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC7A6Q92536 515 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SIGLEC12Q96PQ1 595 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 DCLRE1CQ96SD1 692 aaKnown RBP7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 KCNJ15Q99712 375 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 TIMP4Q99727 224 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF559Q9BR84 538 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 ALG8Q9BVK2 526 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 TMED9Q9BVK6 235 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 HDHD5Q9BXW7 423 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 RNF32Q9H0A6 362 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 TP63Q9H3D4 680 aaPredicted RBP7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 RERGLQ9H628 205 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 ADAP2Q9NPF8 381 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 RBFOX1Q9NWB1 397 aaKnown RBP7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 BABAM2Q9NXR7 383 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 HAO2Q9NYQ3 351 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 MAT2BQ9NZL9 334 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 COMMD3Q9UBI1 195 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 KCNE5Q9UJ90 142 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 SIGLEC7Q9Y286 467 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 MED31Q9Y3C7 131 aa7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 MDC1Q14676 2089 aaKnown RBP7.09□□□□□ -1.27
TM4SF1-201ENST00000305366 LOC102723996A0A087X1L8 192 aa7.08□□□□□ -1.28
TM4SF1-201ENST00000305366 CENPXA8MT69 81 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms