RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 STARD4Q96DR4 205 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 RDH12Q96NR8 316 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 ERMAPQ96PL5 475 aaPredicted RBP8.4□□□□□ -1.06
RFX3-201ENST00000302303 OR2M2Q96R28 347 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 KCNK17Q96T54 332 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 TM9SF2Q99805 663 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 KIF17Q9P2E2 1029 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 KLHL9Q9P2J3 617 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 SH3BGRL2Q9UJC5 107 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
RFX3-201ENST00000302303 ZNF462Q96JM2 2506 aa8.4□□□□□ -1.06
RFX3-201ENST00000302303 TRGV8A0A0C4DH27 118 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 TEX13CA0A0J9YWL9 993 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 LOC100130705A0A1B0GUX0 176 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 OR6C68A6NDL8 312 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 H3BN98 237 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 DCTN6O00399 190 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SURF4O15260 269 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 TRMUO75648 421 aaKnown RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 SERPINI2O75830 405 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 OR6A2O95222 327 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 CLIC3O95833 236 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GNAO1P09471 354 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 PGA4P0DJD7 388 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 PGA3P0DJD8 388 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 FCGR2AP12318 317 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GABRB1P18505 474 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 RPL4P36578 427 aaKnown RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 VHLP40337 213 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 RAD23AP54725 363 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 FOXG1P55316 489 aaPredicted RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 BIDP55957 195 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 CDSNQ15517 529 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SNCBQ16143 134 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SLC35F1Q5T1Q4 408 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 LAIR2Q6ISS4 152 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SLC27A4Q6P1M0 643 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 LRFN4Q6PJG9 635 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 IZUMO2Q6UXV1 221 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 OR2T33Q8NG76 320 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 PTP4A1Q93096 173 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 TMEM54Q969K7 222 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 ZNF837Q96EG3 531 aaPredicted RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 ZNF570Q96NI8 536 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 IFT27Q9BW83 186 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 HCAR1Q9BXC0 346 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 POLDIP3Q9BY77 421 aaKnown RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 PRRG4Q9BZD6 226 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 RIBC2Q9H4K1 309 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 PLSCR4Q9NRQ2 329 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GLRX2Q9NS18 164 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 TBC1D23Q9NUY8 699 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 ZNF226Q9NYT6 803 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 FAM208BQ5VWN6 2430 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 A0A1W2PRG6 482 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GPR171O14626 319 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 IDH3BO43837 385 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 PRKYO43930 277 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 UPK3AO75631 287 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 BCL10O95999 233 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 ACADSP16219 412 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 NOS3P29474 1203 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GRK5P34947 590 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GGT2P36268 569 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 ZNF133P52736 654 aaPredicted RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 MYBPC1Q00872 1141 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SRSF1Q07955 248 aaKnown RBP eCLIP8.39□□□□□ -1.07
RFX3-201ENST00000302303 TOP3AQ13472 1001 aaPredicted RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 CAMK2DQ13557 499 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SF3B4Q15427 424 aaKnown RBP eCLIP8.39□□□□□ -1.07
RFX3-201ENST00000302303 TAF11Q15544 211 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 FREM1Q5H8C1 2179 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 C6orf52Q5T4I8 152 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 TSPO2Q5TGU0 170 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 EEF1A1P5Q5VTE0 462 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GPR139Q6DWJ6 353 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GTF2IRD2BQ6EKJ0 949 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 P4HA3Q7Z4N8 544 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 GTF2IRD2Q86UP8 949 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 ADGRG4Q8IZF6 3080 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 OR4K13Q8NH42 304 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 TEX47Q8TBZ9 253 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SLC25A44Q96H78 314 aaPredicted RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 NMNAT3Q96T66 252 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 NMNAT2Q9BZQ4 307 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 CMC2Q9NRP2 79 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 SLC7A10Q9NS82 523 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 VSX1Q9NZR4 365 aaPredicted RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 AASSQ9UDR5 926 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 PRSS50Q9UI38 385 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 RCE1Q9Y256 329 aa8.39□□□□□ -1.07
RFX3-201ENST00000302303 NOSIPQ9Y314 301 aaKnown RBP8.39□□□□□ -1.07
RFX3-201ENST00000302303 NCOA6Q14686 2063 aaPredicted RBP8.38□□□□□ -1.07
RFX3-201ENST00000302303 SLC22A23A1A5C7 686 aa8.38□□□□□ -1.07
RFX3-201ENST00000302303 PRSS37A4D1T9 235 aa8.38□□□□□ -1.07
RFX3-201ENST00000302303 H7C1C5 153 aa8.38□□□□□ -1.07
RFX3-201ENST00000302303 PYCARD-AS1I3L0S3 204 aa8.38□□□□□ -1.07
RFX3-201ENST00000302303 CCL21O00585 134 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms