RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 OR10H3O60404 316 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 IGHMP01871 453 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 THBDP07204 575 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 CRYGSP22914 178 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 TGFBR3Q03167 851 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 LGALS3BPQ08380 585 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 GABRA6Q16445 453 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 TIMM23BQ5SRD1 257 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 C1QTNF12Q5T7M4 302 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 HDDC2Q7Z4H3 204 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 SLC25A44Q96H78 314 aaPredicted RBP23.66■■□□□ 1.38
SSU72-201ENST00000291386 ALKBH3Q96Q83 286 aaPredicted RBP23.66■■□□□ 1.38
SSU72-201ENST00000291386 TXNIPQ9H3M7 391 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 REEP1Q9H902 201 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 MCCC2Q9HCC0 563 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 SIGLEC7Q9Y286 467 aa23.66■■□□□ 1.38
SSU72-201ENST00000291386 SETXQ7Z333 2677 aaKnown RBP23.66■■□□□ 1.38
SSU72-201ENST00000291386 CIB4A0PJX0 185 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 A6NNC1 897 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 CST1P01037 141 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 PRF1P14222 555 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 DAP3P51398 398 aaKnown RBP23.65■■□□□ 1.38
SSU72-201ENST00000291386 CAMK2DQ13557 499 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 STK11Q15831 433 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 ACKR1Q16570 336 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 ARMC4Q5T2S8 1044 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 C1orf146Q5VVC0 180 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 YTHDF3Q7Z739 585 aaKnown RBP23.65■■□□□ 1.38
SSU72-201ENST00000291386 GPR137CQ8N3F9 429 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 C17orf78Q8N4C9 275 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 ASB10Q8WXI3 467 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 TMEM54Q969K7 222 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 SLCO4A1Q96BD0 722 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 DUS3LQ96G46 650 aaKnown RBP23.65■■□□□ 1.38
SSU72-201ENST00000291386 GPA33Q99795 319 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 VNN3Q9NY84 501 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 STX18Q9P2W9 335 aaKnown RBP23.65■■□□□ 1.38
SSU72-201ENST00000291386 CELSR2Q9HCU4 2923 aa23.65■■□□□ 1.38
SSU72-201ENST00000291386 OR5H1A6NKK0 313 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 FKBP6O75344 327 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 RAD51DO75771 328 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 FPR3P25089 353 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 ROR2Q01974 943 aaKnown RBP23.64■■□□□ 1.37
SSU72-201ENST00000291386 TLE4Q04727 773 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 MELKQ14680 651 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 PHYHD1Q5SRE7 291 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 ZNF770Q6IQ21 691 aaPredicted RBP23.64■■□□□ 1.37
SSU72-201ENST00000291386 HMBOX1Q6NT76 420 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 PGBD2Q6P3X8 592 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 ZNF566Q969W8 418 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 RSRC1Q96IZ7 334 aaKnown RBP23.64■■□□□ 1.37
SSU72-201ENST00000291386 GPR35Q9HC97 309 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 B3GAT2Q9NPZ5 323 aa23.64■■□□□ 1.37
SSU72-201ENST00000291386 SAMHD1Q9Y3Z3 626 aaKnown RBP23.64■■□□□ 1.37
SSU72-201ENST00000291386 UNC119BA6NIH7 251 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 CTAG2O75638 210 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 CIB2O75838 187 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 CCNB2O95067 398 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 PGA4P0DJD7 388 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 PGA3P0DJD8 388 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 ZNF26P17031 533 aaPredicted RBP23.63■■□□□ 1.37
SSU72-201ENST00000291386 GSSP48637 474 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 SH3BGRP55822 239 aaPredicted RBP23.63■■□□□ 1.37
SSU72-201ENST00000291386 CTXN1P60606 82 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 TAB1Q15750 504 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 CARD17Q5XLA6 110 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 GNPDA2Q8TDQ7 276 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 GPX7Q96SL4 187 aaPredicted RBP23.63■■□□□ 1.37
SSU72-201ENST00000291386 MRPL13Q9BYD1 178 aaKnown RBP23.63■■□□□ 1.37
SSU72-201ENST00000291386 NDEL1Q9GZM8 345 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 CRLF2Q9HC73 371 aa23.63■■□□□ 1.37
SSU72-201ENST00000291386 MCIDASD6RGH6 385 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 NDUFB2O95178 105 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 CSNK1A1P48729 337 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 RPL27P61353 136 aaKnown RBP23.62■■□□□ 1.37
SSU72-201ENST00000291386 HIST3H3Q16695 136 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 MICAQ29983 383 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 C9orf135Q5VTT2 229 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 OR1K1Q8NGR3 316 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 OR6N1Q8NGY5 312 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 ZC3HAV1LQ96H79 300 aaKnown RBP23.62■■□□□ 1.37
SSU72-201ENST00000291386 RASSF1Q9NS23 344 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 GLTPQ9NZD2 209 aa23.62■■□□□ 1.37
SSU72-201ENST00000291386 CACNA1DQ01668 2161 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 M0R3G1 203 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 IGHG1P01857 330 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 FXYD6P3P58550 94 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 TSPAN31Q12999 210 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 CCNIQ14094 377 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 CEACAM16Q2WEN9 425 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 FAM205BPQ63HN1 556 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 MAGEE2Q8TD90 523 aaPredicted RBP23.61■■□□□ 1.37
SSU72-201ENST00000291386 SLC17A5Q9NRA2 495 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 ARMC1Q9NVT9 282 aa23.61■■□□□ 1.37
SSU72-201ENST00000291386 ZNF346Q9UL40 294 aaKnown RBP23.61■■□□□ 1.37
SSU72-201ENST00000291386 PRR14LQ5THK1 2151 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 DEFB108AA8MXU0 73 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 TRMUO75648 421 aaKnown RBP23.6■■□□□ 1.37
SSU72-201ENST00000291386 CD14P08571 375 aa23.6■■□□□ 1.37
SSU72-201ENST00000291386 HOXB1P14653 301 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms