RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 C1DQ13901 141 aaKnown RBP16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 SLC17A1Q14916 467 aa16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 ARMC4Q5T2S8 1044 aa16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 KCTD8Q6ZWB6 473 aa16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 FCRLAQ7L513 359 aa16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 GHDCQ8N2G8 530 aa16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 ZNF519Q8TB69 540 aa16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 COPS4Q9BT78 406 aa16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 CNOT2Q9NZN8 540 aaKnown RBP16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 MCTS1Q9ULC4 181 aaKnown RBP16.87■□□□□ 0.29
PDLIM3-202ENST00000284770 PRODHO43272 600 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 RGS10O43665 173 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 SYNGR4O95473 234 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 BCL10O95999 233 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 ACVR1BP36896 505 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 ZNF91Q05481 1191 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 ITGADQ13349 1161 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 KRR1Q13601 381 aaKnown RBP16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 PON3Q15166 354 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 MESTQ5EB52 335 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 XAF1Q6GPH4 301 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 ABLIM2Q6H8Q1 611 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 PRSS48Q7RTY5 328 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 SLC37A3Q8NCC5 494 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 TXNDC15Q96J42 360 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 CNTNAP3BQ96NU0 1288 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 TUBA1CQ9BQE3 449 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 CNTNAP3Q9BZ76 1288 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 PCDHGB1Q9Y5G3 927 aa16.86■□□□□ 0.29
PDLIM3-202ENST00000284770 BSNQ9UPA5 3926 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 EFCAB10A6NFE3 127 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 TRAF3IP2O43734 574 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 CYTIPO60759 359 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 MT-ND2P03891 347 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 DBTP11182 482 aaKnown RBP16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 PIPP12273 146 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 PCMT1P22061 227 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 CDKN2AP42771 156 aaKnown RBP16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 MVKQ03426 396 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 CRMP1Q14194 572 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 NXNL2Q5VZ03 156 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 CREB3L2Q70SY1 520 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 JAZF1Q86VZ6 243 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 CPOQ8IVL8 374 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 NPEPL1Q8NDH3 523 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 SDR9C7Q8NEX9 313 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 OR9K2Q8NGE7 335 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 ZPLD1Q8TCW7 415 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 ASB10Q8WXI3 467 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 SNRNP40Q96DI7 357 aaKnown RBP16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 NMNAT3Q96T66 252 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 DDOQ99489 341 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 MED29Q9NX70 200 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 RPL36Q9Y3U8 105 aaKnown RBP16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 ALPK2Q86TB3 2170 aa16.85■□□□□ 0.29
PDLIM3-202ENST00000284770 FAM183AA6NL82 134 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 ZNF716A6NP11 495 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 PRR23D1E9PI22 279 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 XKRYO14609 159 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 ZNHIT1O43257 154 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 CDK1P06493 297 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 PRR23D2P0DMB1 279 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 PAICSP22234 425 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 ACVR2AP27037 513 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 ST3GAL4Q11206 333 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 LY6DQ14210 128 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 MELKQ14680 651 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 FAM205BPQ63HN1 556 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 PLBD1Q6P4A8 553 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 CXXC5Q7LFL8 322 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 ADCK1Q86TW2 530 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 SATL1Q86VE3 508 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 CYB561A3Q8NBI2 242 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 BBS1Q8NFJ9 593 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 PTP4A1Q93096 173 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 MYDGFQ969H8 173 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 CCDC90BQ9GZT6 254 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 SNX5Q9Y5X3 404 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 KIAA1549Q9HCM3 1950 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 TPRP12270 2363 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 SPENQ96T58 3664 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 A6NIZ1 184 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 ARHGEF9O43307 516 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 JUNBP17275 347 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 C21orf33P30042 268 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 TDGF1P3P51864 188 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 SLC16A1P53985 500 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 RAP1BP61224 184 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 RAP1AP62834 184 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 EMX1Q04741 257 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 LEG1Q6P5S2 330 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 PCSK4Q6UW60 755 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 FGD2Q7Z6J4 655 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 FNDC9Q8TBE3 224 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 RNF128Q8TEB7 428 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 SLX1AQ9BQ83 275 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 HCAR1Q9BXC0 346 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 PRRG4Q9BZD6 226 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 MRPS18AQ9NVS2 196 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms