RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TMEM234Q8WY98 164 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 AMELYQ99218 206 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 EMC6Q9BV81 110 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 CFAP47Q6ZTR5 3102 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 C9J4A7 227 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 MPZL1O95297 269 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 FGF5P12034 268 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 IL11RAQ14626 422 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 CDONQ4KMG0 1287 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 LIPNQ5VXI9 398 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 BMPERQ8N8U9 685 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 SIAEQ9HAT2 523 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 MRPS7Q9Y2R9 242 aaKnown RBP16.19■□□□□ 0.18
CAPN1-201ENST00000279247 LOC400499M0QZD8 3231 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 A0A1W2PNR3 127 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 SPARCP09486 303 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 PSKH1P11801 424 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 ZNF41P51814 821 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-201ENST00000279247 FMODQ06828 376 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 GPR50Q13585 617 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 GGTLC2Q14390 218 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 SLC35D3Q5M8T2 416 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 HGDQ93099 445 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 NXPE2Q96DL1 559 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 PHF3Q92576 2039 aaKnown RBP16.18■□□□□ 0.18
CAPN1-201ENST00000279247 NTN3O00634 580 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-201ENST00000279247 UMODP07911 640 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 CSF3P09919 207 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 ELK1P19419 428 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 POU3F1Q03052 451 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-201ENST00000279247 SGCBQ16585 318 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 SFXN4Q6P4A7 337 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 LIPHQ8WWY8 451 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 CCDC32Q9BV29 185 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 EXTL2Q9UBQ6 330 aa16.18■□□□□ 0.18
CAPN1-201ENST00000279247 ZFPL1O95159 310 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 CTLA4P16410 223 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 LCN1P31025 176 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 PPP3R1P63098 170 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 LRRN1Q6UXK5 716 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 ESPNLQ6ZVH7 1005 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 FAM220AQ7Z4H9 259 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 DRAXINQ8NBI3 349 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-201ENST00000279247 WDFY2Q96P53 400 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 MMP28Q9H239 520 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 FAM186AA6NE01 2351 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 SNPHO15079 494 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 F10P00742 488 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 SNRPBP14678 240 aaKnown RBP16.17■□□□□ 0.18
CAPN1-201ENST00000279247 IFNGR1P15260 489 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 OTX2P32243 289 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 MTNR1BP49286 362 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 RAB15P59190 212 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 RPL27P61353 136 aaKnown RBP16.17■□□□□ 0.18
CAPN1-201ENST00000279247 TMEM205Q6UW68 189 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 SLC16A9Q7RTY1 509 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 GPAT4Q86UL3 456 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 Q8N402 240 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 LRFN5Q96NI6 719 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 NDEL1Q9GZM8 345 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 ZNF160Q9HCG1 818 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 NOX4Q9NPH5 578 aa16.17■□□□□ 0.18
CAPN1-201ENST00000279247 MRM2Q9UI43 246 aaKnown RBP16.17■□□□□ 0.18
CAPN1-201ENST00000279247 ANKUB1A6NFN9 424 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 TMED10P49755 219 aaKnown RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 TLE3Q04726 772 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 MZT2AQ6P582 158 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 TIGD4Q8IY51 512 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 TXNDC15Q96J42 360 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 INTS14Q96SY0 518 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PISDQ9UG56 409 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 UGT2A1Q9Y4X1 527 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 OTOGLQ3ZCN5 2332 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 SPTBN2O15020 2390 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 EXPH5Q8NEV8 1989 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 ANKRD33BA6NCL7 494 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 ZNF593O00488 134 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PLPP3O14495 311 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 NPIPB7O75200 414 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 RAB3BP20337 219 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 INSM1Q01101 510 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 ZFP36L1Q07352 338 aaKnown RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PCOLCEQ15113 449 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 RPL22L1Q6P5R6 122 aaKnown RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 FAM198BQ6UWH4 519 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 MDGA2Q7Z553 956 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 WDFY1Q8IWB7 410 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 SYS1Q8N2H4 156 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 MS4A15Q8N5U1 240 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 EXD3Q8N9H8 876 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 ZNF248Q8NDW4 579 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 SLC22A8Q8TCC7 542 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 C12orf10Q9HB07 376 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PTPRZ1P23471 2315 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 A0A0G2JMP0 313 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 A0A0X1KG70 313 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PRSS37A4D1T9 235 aa16.16■□□□□ 0.18
CAPN1-201ENST00000279247 KLF7O75840 302 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-201ENST00000279247 PTTG1O95997 202 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms