RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ACOXLQ9NUZ1 547 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 VSX1Q9NZR4 365 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 COMMD3Q9UBI1 195 aa8.64□□□□□ -1.03
TRIM55-201ENST00000276573 CHCHD2Q9Y6H1 151 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-201ENST00000276573 NSG1A0A0A6YYJ2 146 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 A0A1W2PRG6 482 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 FUOMA2VDF0 154 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 FABP12A6NFH5 140 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 TACSTD2P09758 323 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 TFPIP10646 304 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 CFL1P23528 166 aaKnown RBP8.63□□□□□ -1.03
TRIM55-201ENST00000276573 PPP3R1P63098 170 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 INSM1Q01101 510 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-201ENST00000276573 SNTA1Q13424 505 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 SF3A2Q15428 464 aaKnown RBP8.63□□□□□ -1.03
TRIM55-201ENST00000276573 OR7A5Q15622 319 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF79Q15937 498 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 GLYR1Q49A26 553 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-201ENST00000276573 FAM27D1Q5T7N8 215 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 MZT2AQ6P582 158 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 TMEM81Q6P7N7 255 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 XKRXQ6PP77 449 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 TIPARPQ7Z3E1 657 aaKnown RBP8.63□□□□□ -1.03
TRIM55-201ENST00000276573 NR2C2APQ86WQ0 139 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 KDM8Q8N371 416 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 FADS6Q8N9I5 356 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 WDSUB1Q8N9V3 476 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 POC5Q8NA72 575 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 RPS4Y2Q8TD47 263 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-201ENST00000276573 PPP1R14BQ96C90 147 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 NXPE2Q96DL1 559 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 KLHL15Q96M94 604 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 FRMD6Q96NE9 622 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 SOSTQ9BQB4 213 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 SPRY4Q9C004 299 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 SP140LQ9H930 580 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 WDR76Q9H967 626 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF160Q9HCG1 818 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 SERINC1Q9NRX5 453 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 FBXL2Q9UKC9 423 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 KLHDC2Q9Y2U9 406 aa8.63□□□□□ -1.03
TRIM55-201ENST00000276573 SLC22A23A1A5C7 686 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 LIPT2A6NK58 231 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 PSMD9O00233 223 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 GPRIN2O60269 458 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 HPGDSO60760 199 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 AKR7A3O95154 331 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 GPANK1O95872 356 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 RAB40ALP0C0E4 278 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 HLA-DOBP13765 273 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 TCN2P20062 427 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 ALOX5APP20292 161 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 MYL9P24844 172 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 CENPAP49450 140 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 BCAP31P51572 246 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 BLVRAP53004 296 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 RPS11P62280 158 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM55-201ENST00000276573 PUDPQ08623 228 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 CDC20Q12834 499 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 ZMAT1Q5H9K5 638 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 RPS19BP1Q86WX3 136 aaKnown RBP8.62□□□□□ -1.03
TRIM55-201ENST00000276573 NAXDQ8IW45 347 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 OR8H2Q8N162 312 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 OR13C5Q8NGS8 318 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 OR6N2Q8NGY6 317 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 ACOT12Q8WYK0 555 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 NTNG2Q96CW9 530 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 INTS14Q96SY0 518 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 ANGPTL4Q9BY76 406 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 SRRQ9GZT4 340 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 CHST11Q9NPF2 352 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 MRM2Q9UI43 246 aaKnown RBP8.62□□□□□ -1.03
TRIM55-201ENST00000276573 LAMP5Q9UJQ1 280 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 TCFL5Q9UL49 500 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 FARSAQ9Y285 508 aaKnown RBP8.62□□□□□ -1.03
TRIM55-201ENST00000276573 TMEM14AQ9Y6G1 99 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 IGLV1-36A0A0B4J1U3 117 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 TRAV1-2A0A0B4J238 106 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 PMS2P1A4D2B8 440 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 A6NIZ1 184 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 FAM47E-STBD1D6RA91 191 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 H3BML4 177 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 SLC16A7O60669 478 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 FZD7O75084 574 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 UPK3AO75631 287 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 GATBO75879 557 aaKnown RBP8.62□□□□□ -1.03
TRIM55-201ENST00000276573 DLGAP3O95886 979 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 OR8G3PP0DMU2 310 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 EVX1P49640 407 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 SSR4P51571 173 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 MLF1P58340 268 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 NANOS3P60323 173 aaKnown RBP8.62□□□□□ -1.03
TRIM55-201ENST00000276573 RAP1BP61224 184 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 RAP1AP62834 184 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 TLE3Q04726 772 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 MELKQ14680 651 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 SSPNQ14714 243 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 IDNKQ5T6J7 187 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms