RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SLC35G1Q2M3R5 365 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 DEFB110Q30KQ9 67 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 FAM185AQ8N0U4 392 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 CADM3Q8N126 398 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 SIGLECL1Q8N7X8 197 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 OR52E1Q8NGJ3 308 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 CORO2AQ92828 525 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 B3GALT5Q9Y2C3 310 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 TMEM184BQ9Y519 407 aaPredicted RBP8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 CORINQ9Y5Q5 1042 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 BAZ2BQ9UIF8 2168 aaKnown RBP8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 TMEM72A0PK05 275 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 AOAHP28039 575 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 CCR7P32248 378 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 RAC1P63000 192 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 SUMO1P63165 101 aaKnown RBP8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 TNFRSF17Q02223 184 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 VAMP3Q15836 100 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 HYAL4Q2M3T9 481 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 LRP10Q7Z4F1 713 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 MEX3DQ86XN8 651 aaKnown RBP8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 CHST14Q8NCH0 376 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 SLC25A46Q96AG3 418 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 MAP3K3Q99759 626 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 SORBS1Q9BX66 1292 aaKnown RBP8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 ERVMER34-1Q9H9K5 563 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 B3GAT1Q9P2W7 334 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 ZFP92A6NM28 416 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 TMX2-CTNND1H3BSU7 103 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 CLDN12P56749 244 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 COL13A1Q5TAT6 717 aaPredicted RBP8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 IL34Q6ZMJ4 242 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 NAXDQ8IW45 347 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 LILRA2Q8N149 483 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 NHLRC2Q8NBF2 726 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 SLC24A4Q8NFF2 622 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 LRFN5Q96NI6 719 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 CHRDL1Q9BU40 450 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 POFUT1Q9H488 388 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 FBXO8Q9NRD0 319 aa8.07□□□□□ -1.12
SCUBE3-201ENST00000274938 IGKV6-21A0A0C4DH24 114 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 C4orf47A7E2U8 309 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ZNF724A8MTY0 619 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 CTRB1P17538 263 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ACHEP22303 614 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SOX18P35713 384 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 VASPP50552 380 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 RUNX2Q13950 521 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 CTRB2Q6GPI1 263 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 FAM180BQ6P0A1 224 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 USP53Q70EK8 1073 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SYT13Q7L8C5 426 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 TP53INP2Q8IXH6 220 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 CPXM2Q8N436 756 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 DTD2Q96FN9 168 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 NECTIN4Q96NY8 510 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 OR51I2Q9H344 312 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ASIC5Q9NY37 505 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 MED16Q9Y2X0 877 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 PRAMEF26H0Y7S4 382 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 M0QYG6 137 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 MRPL33O75394 65 aaKnown RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ELAVL4P26378 380 aaKnown RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 GDF1P27539 372 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ZNF93P35789 620 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ZNF90Q03938 601 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 LEXMQ3ZCV2 418 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SSX7Q7RTT5 188 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 CLEC14AQ86T13 490 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 NLGN4YQ8NFZ3 816 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 TMEM38AQ9H6F2 299 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 IFT22Q9H7X7 185 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 PLEKHA2Q9HB19 425 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 HEYLQ9NQ87 328 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ZNF230Q9UIE0 474 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 LOC102724200A0A096LPH7 203 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ACOT8O14734 319 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 TMEM127O75204 238 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 IGHEP01854 428 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 NKX2-1P43699 371 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 EXOSC7Q15024 291 aaKnown RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ESPNLQ6ZVH7 1005 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 OR2L13Q8N349 312 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 NANOGP1Q8N7R0 232 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 DYNC2LI1Q8TCX1 351 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 LRRC15Q8TF66 581 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 OR5M11Q96RB7 305 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ADOQ96SZ5 270 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 NKX2-4Q9H2Z4 354 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 TUBB1Q9H4B7 451 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 BOKQ9UMX3 212 aaPredicted RBP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SNX11Q9Y5W9 270 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SERINC4A6NH21 518 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SUSD5O60279 629 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 MBP02144 154 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 GABRA2P47869 451 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SUB1P53999 127 aaKnown RBP eCLIP8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 SLC36A2Q495M3 483 aa8.06□□□□□ -1.12
SCUBE3-201ENST00000274938 ZNF836Q6ZNA1 936 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms