RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 OR14J1Q9UGF5 321 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 hCG_1809904A0A1W2PP81 198 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 A0A1W2PPE2 198 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 A0A1W2PR64 198 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 A0A1W2PRV1 198 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 F13BP05160 661 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 CASP3P42574 277 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 LEXMQ3ZCV2 418 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 MUTYHQ9UIF7 546 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 ACSM1Q08AH1 577 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 PCK2Q16822 640 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 GLYR1Q49A26 553 aaPredicted RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 TOE1Q96GM8 510 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 CPPED1Q9BRF8 314 aaPredicted RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 ZCCHC4Q9H5U6 513 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 TAGLNQ01995 201 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 PARS2Q7L3T8 475 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 OR52I1Q8NGK6 324 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 SGPP1Q9BX95 441 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 SELENOIQ9C0D9 397 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC39A9Q9NUM3 307 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 TACR3P29371 465 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 EBPQ15125 230 aaKnown RBP16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 PTRH1Q86Y79 214 aaKnown RBP16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 OR1S2Q8NGQ3 325 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 CLSTN3Q9BQT9 956 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 CAMK2AQ9UQM7 478 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 PTBP1P26599 531 aaKnown RBP eCLIP16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 GCAP28676 217 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 OPN5Q6U736 354 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 OR10K1Q8NGX5 313 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 OR10R2Q8NGX6 335 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 NAGAP17050 411 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 HNF4GQ14541 408 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 SYPL1Q16563 259 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 Q499Y3 187 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 ZMAT1Q5H9K5 638 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 DPPA2Q7Z7J5 298 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 PPP1R3BQ86XI6 285 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 OR13F1Q8NGS4 319 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 ULBP3Q9BZM4 244 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 TRAPPC2LQ9UL33 140 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 TMEM200CA6NKL6 621 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 PSMB3P49720 205 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 AKR1C1Q04828 323 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 RBPJQ06330 500 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 MORN1Q5T089 497 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 STEAP3Q658P3 488 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 KDM8Q8N371 416 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 CMTM2Q8TAZ6 248 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 TPSD1Q9BZJ3 242 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 ISYNA1Q9NPH2 558 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 CXXC1Q9P0U4 656 aaPredicted RBP16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 GM2AP17900 193 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 DEFB133Q30KQ1 61 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 OR4A16Q8NH70 328 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 MPDZO75970 2070 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 CTDSP2O14595 271 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 CYBAP13498 195 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 CNR1P21554 472 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 ELAVL4P26378 380 aaKnown RBP16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 RAB38P57729 211 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 UFSP2Q9NUQ7 469 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 DOCK9Q9BZ29 2069 aa16.19■□□□□ 0.18
NOTCH3-201ENST00000263388 AADACP22760 399 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 LAP3P28838 519 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 CGB2Q6NT52 195 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 FAM111BQ6SJ93 734 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ADIPOR2Q86V24 386 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 C19orf47Q8N9M1 422 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 GINS3Q9BRX5 216 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 EXO1Q9UQ84 846 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ATXN1LP0C7T5 689 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 FCGR2AP12318 317 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 SNTB1Q13884 538 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 OR2G6Q5TZ20 316 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 SHEQ5VZ18 495 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 OR5H6Q8NGV6 325 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ABHD4Q8TB40 342 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 LINC01599Q8WXQ3 324 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 B3GAT1Q9P2W7 334 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 DPP4P27487 766 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 IKZF1Q13422 519 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 ALKAL2Q6UX46 152 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 DBX2Q6ZNG2 339 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 SPRED1Q7Z699 444 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 DUSP19Q8WTR2 217 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 QRSL1Q9H0R6 528 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 PRAMEF4O60810 478 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 PMS2P2O95744 297 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 FOLR1P15328 257 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 CD38P28907 300 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 EIF1P41567 113 aaKnown RBP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 KCNJ8Q15842 424 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 LYSMD4Q5XG99 296 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 RNF32Q9H0A6 362 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 RAB22AQ9UL26 194 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 CDC14CA4D256 554 aa16.18■□□□□ 0.18
NOTCH3-201ENST00000263388 CHEK1O14757 476 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms