RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TAC4Q86UU9 113 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 PARGQ86W56 976 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 NELFCDQ8IXH7 590 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 Q8N9G6 341 aaPredicted RBP3.29□□□□□ -1.88
CCDC54-201ENST00000261058 OR5T3Q8NGG3 340 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 MARCH1Q8TCQ1 289 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 PYDC1Q8WXC3 89 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 ARNTL2Q8WYA1 636 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SH3YL1Q96HL8 342 aaPredicted RBP3.29□□□□□ -1.88
CCDC54-201ENST00000261058 PPP1R16AQ96I34 528 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SERAC1Q96JX3 654 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SIGLEC12Q96PQ1 595 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 FEM1AQ9BSK4 669 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 CNPY3Q9BT09 278 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 C20orf24Q9BUV8 137 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 TM2D1Q9BX74 207 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SLC22A4Q9H015 551 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 ILKAPQ9H0C8 392 aaPredicted RBP3.29□□□□□ -1.88
CCDC54-201ENST00000261058 RAB1BQ9H0U4 201 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 NARFLQ9H6Q4 476 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 ANKRA2Q9H9E1 313 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 MRPL47Q9HD33 250 aaKnown RBP3.29□□□□□ -1.88
CCDC54-201ENST00000261058 LYRM4Q9HD34 91 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SLC40A1Q9NP59 571 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 ZNF302Q9NR11 478 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 DIABLOQ9NR28 239 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 RBAKQ9NYW8 714 aaPredicted RBP3.29□□□□□ -1.88
CCDC54-201ENST00000261058 AHSPQ9NZD4 102 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 MTCH1Q9NZJ7 389 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 Q9UF83 564 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 APOBEC3BQ9UH17 382 aaKnown RBP3.29□□□□□ -1.88
CCDC54-201ENST00000261058 GINS2Q9Y248 185 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 GSTK1Q9Y2Q3 226 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 PLLPQ9Y342 182 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 LRRC42Q9Y546 428 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 V9GYQ6 96 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SCAPERQ9BY12 1400 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 MTUS2Q5JR59 1369 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 A0A1W2PPE3 182 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 A0A1W2PQ67 120 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 TRPC5OSA6NMA1 111 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 TMEM114B3SHH9 223 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 E7ENQ6 273 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 LAD1O00515 517 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CDX4O14627 284 aaPredicted RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SLC9A3R1O14745 358 aaPredicted RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 BCKDKO14874 412 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PPIHO43447 177 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SCN2BO60939 215 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 OXSR1O95747 527 aaPredicted RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 DHFRP00374 187 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 FABP1P07148 127 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 DCNP07585 359 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 KRT16P08779 473 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 OR4E1P0C645 316 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 BCKDHAP12694 445 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PGAM2P15259 253 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PCMT1P22061 227 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 IDSP22304 550 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 IGHV1-2P23083 117 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 MDH2P40926 338 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 TMED10P49755 219 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 MEOX2P50222 304 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SLC26A2P50443 739 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 TPMTP51580 245 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SLC25A1P53007 311 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CEBPGP53567 150 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PSMD4P55036 377 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PRPS1P60891 318 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SPCS3P61009 180 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CDK16Q00536 496 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 UBE2V2Q15819 145 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PSG3Q16557 428 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 MICBQ29980 383 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SFT2D3Q587I9 215 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PAN3Q58A45 887 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 TEX30Q5JUR7 227 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 BRMS1LQ5PSV4 323 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 DCST2Q5T1A1 773 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 HES5Q5TA89 166 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 OLFML2AQ68BL7 652 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 FAM71F2Q6NXP2 309 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 Q7L0L9 218 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SNX20Q7Z614 316 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 PLA2G4DQ86XP0 818 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 RBM45Q8IUH3 476 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 NUDCD3Q8IVD9 361 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 GPD1LQ8N335 351 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 RHEBL1Q8TAI7 183 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 MCOLN3Q8TDD5 553 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 ING5Q8WYH8 240 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 FAM3CQ92520 227 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 NRGNQ92686 78 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 MYDGFQ969H8 173 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CCDC127Q96BQ5 260 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 AKR1E2Q96JD6 320 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms